Conservation of cofitness between GFF4843 and GFF3168 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4843 D-glucarate permease 1.0 GFF3168 Adenylate cyclase (EC 4.6.1.1) 0.56 14
Escherichia coli BW25113 0.97 b2789 gudP predicted D-glucarate transporter (NCBI) 0.84 b3054 ygiF predicted adenylate cyclase (NCBI) low > 76
Escherichia coli ECRC62 0.97 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 0.86 BNILDI_01005 ygiF inorganic triphosphatase low > 75
Escherichia fergusonii Becca 0.97 EFB2_01128 putative glucarate transporter 0.84 EFB2_00757 Inorganic triphosphatase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_00942 putative glucarate transporter 0.84 OHPLBJKB_00650 Inorganic triphosphatase low > 73
Escherichia coli BL21 0.97 ECD_02634 putative D-glucarate transporter 0.84 ECD_02924 inorganic triphosphatase low > 61
Escherichia coli Nissle 1917 0.97 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 0.84 ECOLIN_RS17625 inorganic triphosphatase low > 55
Escherichia coli ECOR27 0.97 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 0.85 NOLOHH_10510 ygiF inorganic triphosphatase low > 75
Escherichia coli ECOR38 0.97 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 0.84 HEPCGN_17580 ygiF inorganic triphosphatase low > 87
Escherichia coli ECRC101 0.97 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 0.85 MCAODC_09240 ygiF inorganic triphosphatase low > 87
Escherichia coli ECRC98 0.97 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 0.85 JDDGAC_22360 ygiF inorganic triphosphatase low > 86
Escherichia coli ECRC99 0.97 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 0.85 KEDOAH_09420 ygiF inorganic triphosphatase — —
Escherichia coli ECRC100 0.97 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 0.85 OKFHMN_18725 ygiF inorganic triphosphatase low > 80
Escherichia coli ECRC102 0.97 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 0.85 NIAGMN_16490 ygiF inorganic triphosphatase — —
Klebsiella michiganensis M5al 0.97 BWI76_RS22835 MFS transporter 0.59 BWI76_RS24465 adenylate cyclase low > 92
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2870 D-galactonate transporter 0.75 EX28DRAFT_3082 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03659 putative glucarate transporter 0.72 MPMX20_03891 Inorganic triphosphatase low > 85
Rahnella sp. WP5 0.86 EX31_RS03160 MFS transporter 0.48 EX31_RS08150 inorganic triphosphatase low > 89
Erwinia tracheiphila SCR3 0.85 LU632_RS06310 MFS transporter 0.45 LU632_RS20680 inorganic triphosphatase low > 74
Pectobacterium carotovorum WPP14 0.84 HER17_RS04075 MFS transporter 0.45 HER17_RS04030 inorganic triphosphatase low > 75
Pantoea sp. MT58 0.83 IAI47_04080 MFS transporter 0.48 IAI47_03095 inorganic triphosphatase low > 76
Dickeya dadantii 3937 0.82 DDA3937_RS17055 MFS transporter 0.43 DDA3937_RS17110 inorganic triphosphatase low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS18185 MFS transporter 0.43 DZA65_RS18245 inorganic triphosphatase 0.30 45
Dickeya dianthicola 67-19 0.82 HGI48_RS17110 MFS transporter 0.43 HGI48_RS17160 inorganic triphosphatase low > 71
Pseudomonas fluorescens SBW25 0.68 PFLU_RS04245 MFS transporter 0.10 PFLU_RS28865 inorganic triphosphatase 0.42 11
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS04245 MFS transporter 0.10 PFLU_RS28865 inorganic triphosphatase low > 109
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_5043 D-galactarate permease 0.09 PfGW456L13_911 Adenylate cyclase (EC 4.6.1.1) 0.36 6
Pseudomonas simiae WCS417 0.68 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.10 PS417_27205 adenylate cyclase low > 88
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_3297 D-galactarate permease 0.09 Pf6N2E2_4494 Adenylate cyclase (EC 4.6.1.1) low > 103
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1108 D-galactarate permease 0.09 Pf1N1B4_2241 Adenylate cyclase (EC 4.6.1.1) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_4226 D-galactonate transporter 0.10 Psyr_0252 adenylate cyclase low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_4226 D-galactonate transporter 0.10 Psyr_0252 adenylate cyclase low > 86
Pseudomonas stutzeri RCH2 0.09 Psest_4232 Sugar phosphate permease 0.10 Psest_4004 Uncharacterized conserved protein low > 67

Not shown: 18 genomes with orthologs for GFF4843 only; 4 genomes with orthologs for GFF3168 only