Conservation of cofitness between GFF2761 and GFF3103 in Variovorax sp. SCN45

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF2761 Glutamine ABC transporter, permease protein GlnP 1.0 GFF3103 Cys-tRNA(Pro) deacylase YbaK 0.56 4
Herbaspirillum seropedicae SmR1 0.83 HSERO_RS17545 glutamine ABC transporter permease 0.71 HSERO_RS04270 membrane protein low > 78
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS33760 glutamine ABC transporter permease GlnP 0.72 QEN71_RS02765 Cys-tRNA(Pro) deacylase low > 153
Ralstonia solanacearum PSI07 0.82 RPSI07_RS14110 glutamine ABC transporter permease GlnP 0.66 RPSI07_RS12155 Cys-tRNA(Pro) deacylase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_02614 L-glutamine ABC transporter membrane protein 0.74 H281DRAFT_04124 Cys-tRNA(Pro) deacylase low > 103
Paraburkholderia graminis OAS925 0.67 ABIE53_004513 glutamine transport system permease protein 0.74 ABIE53_003359 Cys-tRNA(Pro) deacylase low > 113
Pantoea sp. MT58 0.63 IAI47_13205 glutamine ABC transporter permease GlnP 0.26 IAI47_14410 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 76
Escherichia coli ECRC102 0.62 NIAGMN_04260 glnP glutamine ABC transporter permease GlnP 0.25 NIAGMN_06155 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK — —
Escherichia coli ECRC62 0.62 BNILDI_20845 glnP glutamine ABC transporter permease GlnP 0.26 BNILDI_22455 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 75
Escherichia coli ECRC99 0.62 KEDOAH_21695 glnP glutamine ABC transporter permease GlnP 0.25 KEDOAH_19865 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK — —
Escherichia coli ECRC101 0.62 MCAODC_25430 glnP glutamine ABC transporter permease GlnP 0.25 MCAODC_27325 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 87
Escherichia coli ECRC98 0.62 JDDGAC_09850 glnP glutamine ABC transporter permease GlnP 0.25 JDDGAC_11750 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_02903 Glutamine transport system permease protein GlnP 0.26 OHPLBJKB_03193 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 73
Escherichia coli BL21 0.62 ECD_00777 glutamine transporter subunit 0.26 ECD_00432 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase low > 61
Escherichia coli ECRC100 0.62 OKFHMN_06215 glnP glutamine ABC transporter permease GlnP 0.25 OKFHMN_08105 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 80
Escherichia fergusonii Becca 0.62 EFB2_03295 Glutamine transport system permease protein GlnP 0.26 EFB2_03577 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 86
Escherichia coli Nissle 1917 0.62 ECOLIN_RS04315 glutamine ABC transporter permease GlnP 0.26 ECOLIN_RS02850 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK — —
Escherichia coli BW25113 0.62 b0810 glnP glutamine ABC transporter permease protein (NCBI) 0.26 b0481 ybaK hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.62 NOLOHH_22565 glnP glutamine ABC transporter permease GlnP 0.26 NOLOHH_01035 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 75
Escherichia coli ECOR38 0.62 HEPCGN_01825 glnP glutamine ABC transporter permease GlnP 0.26 HEPCGN_06725 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 87
Enterobacter sp. TBS_079 0.61 MPMX20_01439 Glutamine transport system permease protein GlnP 0.22 MPMX20_01082 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 85
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2180 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.23 EX28DRAFT_2477 Cys-tRNA(Pro) deacylase low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS08970 glutamine ABC transporter permease GlnP 0.24 BWI76_RS06870 aminoacyl-tRNA deacylase low > 92
Rahnella sp. WP5 0.61 EX31_RS18980 glutamine ABC transporter permease GlnP 0.25 EX31_RS22565 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF705 Glutamate transport membrane-spanning protein 0.24 GFF4401 Cys-tRNA(Pro) deacylase YbaK low > 78
Erwinia tracheiphila SCR3 0.59 LU632_RS09450 glnP glutamine ABC transporter permease GlnP 0.24 LU632_RS15310 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 74
Serratia liquefaciens MT49 0.58 IAI46_07530 glutamine ABC transporter permease GlnP 0.26 IAI46_05300 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS13070 glutamine ABC transporter permease GlnP 0.24 HER17_RS15635 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 75
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_1919 polar amino acid ABC transporter, inner membrane subunit (RefSeq) 0.23 DvMF_2065 ybaK/ebsC protein (RefSeq) low > 51
Marinobacter adhaerens HP15 0.49 HP15_2919 amino acid ABC transporter, permease protein 0.20 HP15_3802 conserved hypothetical protein CHP00011 low > 73
Azospirillum sp. SherDot2 0.33 MPMX19_05098 Arginine transport system permease protein ArtQ 0.22 MPMX19_02507 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 112

Not shown: 4 genomes with orthologs for GFF2761 only; 47 genomes with orthologs for GFF3103 only