| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Phaeobacter inhibens DSM 17395 | 1.0 | PGA1_c16540 | | putative branched-chain amino acid transport system, permease component | 1.0 | PGA1_c30790 | | HTH-type transcriptional regulator, LysR family | 0.44 | 1 |
| Azospirillum brasilense Sp245 | 0.31 | AZOBR_RS04135 | | ABC transporter permease | 0.13 | AZOBR_RS14665 | | LysR family transcriptional regulator | — | — |
| Azospirillum sp. SherDot2 | 0.29 | MPMX19_03535 | | hypothetical protein | 0.20 | MPMX19_05150 | | HTH-type transcriptional activator CmpR | low | > 112 |
| Herbaspirillum seropedicae SmR1 | 0.27 | HSERO_RS18260 | | branched-chain amino acid ABC transporter permease | 0.15 | HSERO_RS13130 | | LysR family transcriptional regulator | low | > 78 |
| Variovorax sp. SCN45 | 0.25 | GFF4959 | | ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) | 0.17 | GFF1625 | | Transcriptional regulator, LysR family | low | > 127 |
| Ralstonia solanacearum UW163 | 0.25 | UW163_RS21550 | | branched-chain amino acid ABC transporter permease | 0.16 | UW163_RS19305 | | LysR family transcriptional regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.25 | RALBFv3_RS17600 | | branched-chain amino acid ABC transporter permease | 0.16 | RALBFv3_RS19870 | | LysR family transcriptional regulator | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS15765 | | branched-chain amino acid ABC transporter permease | 0.14 | ABZR87_RS20480 | | LysR family transcriptional regulator | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.20 | Psyr_4428 | | amino acid/amide ABC transporter membrane protein 2, HAAT family | 0.15 | Psyr_5062 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.20 | Psyr_4428 | | amino acid/amide ABC transporter membrane protein 2, HAAT family | 0.15 | Psyr_5062 | | transcriptional regulator, LysR family | 0.34 | 9 |
| Pseudomonas fluorescens FW300-N2E2 | 0.20 | Pf6N2E2_3549 | | Urea ABC transporter, permease protein UrtC | 0.14 | Pf6N2E2_453 | | LysR family transcriptional regulator STM2281 | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.20 | PfGW456L13_83 | | Urea ABC transporter, permease protein UrtC | 0.16 | PfGW456L13_2573 | | transcriptional regulator, MerR family | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.19 | Pf1N1B4_1345 | | Urea ABC transporter, permease protein UrtC | 0.16 | Pf1N1B4_3961 | | transcriptional regulator, MerR family | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.19 | AO356_08350 | | urea ABC transporter permease subunit UrtC | 0.14 | AO356_22835 | | LysR family transcriptional regulator | — | — |
| Pseudomonas sp. S08-1 | 0.19 | OH686_07670 | | urea ABC transporter, permease protein UrtC | 0.16 | OH686_10780 | | Transcriptional regulator, LysR family | low | > 80 |
| Rahnella sp. WP5 | 0.18 | EX31_RS05630 | | urea ABC transporter permease subunit UrtC | 0.14 | EX31_RS19050 | | LysR family transcriptional regulator | low | > 89 |
Not shown: 12 genomes with orthologs for PGA1_c16540 only; 24 genomes with orthologs for PGA1_c30790 only