Conservation of cofitness between PS417_04290 and PS417_15310 in Pseudomonas simiae WCS417

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04290 hypothetical protein 1.0 PS417_15310 type VI secretion protein 0.33 19
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1091 FIG138315: Putative alpha helix protein 0.70 Pf1N1B4_2086 Protein ImpG/VasA low > 87
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_07090 hypothetical protein 0.66 AO356_12145 type VI secretion protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_3279 FIG138315: Putative alpha helix protein 0.66 Pf6N2E2_4301 Protein ImpG/VasA low > 103
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_05210 hypothetical protein 0.69 AO353_09425 type VI secretion protein low > 101
Pseudomonas sp. S08-1 0.80 OH686_08575 UPF0307 protein YjgA 0.64 OH686_12825 T6SS component TssF (ImpG/VasA) low > 80
Pseudomonas putida KT2440 0.77 PP_0941 putative ribosome associated protein 0.33 PP_4077 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.74 Psest_3319 Uncharacterized protein conserved in bacteria 0.65 Psest_0127 type VI secretion protein, VC_A0110 family low > 67
Pectobacterium carotovorum WPP14 0.36 HER17_RS20095 ribosome-associated protein 0.34 HER17_RS04855 type VI secretion system baseplate subunit TssF — —
Marinobacter adhaerens HP15 0.35 HP15_2448 protein belonging to uncharacterized protein family UPF0307 0.39 HP15_3473 type VI secretion system, VCA0110 low > 73
Enterobacter sp. TBS_079 0.34 MPMX20_00516 hypothetical protein 0.22 MPMX20_01644 hypothetical protein — —
Dickeya dadantii 3937 0.34 DDA3937_RS01495 ribosome-associated protein 0.33 DDA3937_RS07030 type VI secretion system baseplate subunit TssF low > 74
Enterobacter asburiae PDN3 0.34 EX28DRAFT_3421 Uncharacterized protein conserved in bacteria 0.23 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family — —
Dickeya dianthicola 67-19 0.32 HGI48_RS01410 ribosome-associated protein 0.33 HGI48_RS07960 type VI secretion system baseplate subunit TssF low > 71
Pantoea sp. MT58 0.32 IAI47_02760 ribosome-associated protein 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF — —
Dickeya dianthicola ME23 0.32 DZA65_RS01475 ribosome-associated protein 0.34 DZA65_RS08555 type VI secretion system baseplate subunit TssF — —
Erwinia tracheiphila SCR3 0.32 LU632_RS02140 ribosome-associated protein 0.33 LU632_RS17675 tssF type VI secretion system baseplate subunit TssF low > 74
Escherichia coli ECOR27 0.32 NOLOHH_04190 yjgA ribosome-associated protein 0.29 NOLOHH_02230 tssF Type VI secretion system protein TssF low > 57
Escherichia coli ECRC101 0.32 OKFHMN_11930 yjgA ribosome-associated protein 0.29 OKFHMN_09870 tssF Type VI secretion system protein TssF — —
Escherichia coli Nissle 1917 0.32 ECOLIN_RS24565 ribosome biogenesis factor YjgA 0.22 ECOLIN_RS15765 type VI secretion system baseplate subunit TssF low > 52
Escherichia coli ECRC101 0.32 MCAODC_02435 yjgA ribosome-associated protein 0.29 MCAODC_00390 tssF Type VI secretion system protein TssF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03801 hypothetical protein 0.29 OHPLBJKB_03430 hypothetical protein low > 73
Escherichia coli ECRC99 0.32 KEDOAH_16225 yjgA ribosome-associated protein 0.29 KEDOAH_18280 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC102 0.32 NIAGMN_09780 yjgA ribosome-associated protein 0.29 NIAGMN_07720 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC98 0.32 JDDGAC_15570 yjgA ribosome-associated protein 0.29 JDDGAC_13470 tssF Type VI secretion system protein TssF — —
Escherichia fergusonii Becca 0.32 EFB2_04299 hypothetical protein 0.22 EFB2_01077 hypothetical protein low > 86
Rahnella sp. WP5 0.31 EX31_RS12315 ribosome-associated protein 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF low > 89

Not shown: 31 genomes with orthologs for PS417_04290 only; 3 genomes with orthologs for PS417_15310 only