Conservation of cofitness between GFF3863 and GFF2942 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3863 A/G-specific adenine glycosylase (EC 3.2.2.-) 1.0 GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.88 8
Escherichia coli Nissle 1917 0.79 ECOLIN_RS12150 outer membrane assembly protein AsmA 0.96 ECOLIN_RS18405 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Escherichia coli ECRC102 0.78 NIAGMN_22225 asmA outer membrane assembly protein AsmA 0.96 NIAGMN_15720 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Escherichia coli ECRC100 0.78 OKFHMN_24280 asmA outer membrane assembly protein AsmA 0.96 OKFHMN_17960 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 80
Escherichia coli ECRC98 0.78 JDDGAC_28390 asmA outer membrane assembly protein AsmA 0.96 JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 86
Escherichia coli ECRC99 0.78 KEDOAH_03870 asmA outer membrane assembly protein AsmA 0.96 KEDOAH_10190 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Escherichia coli ECRC101 0.78 MCAODC_20660 asmA outer membrane assembly protein AsmA 0.96 MCAODC_08480 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 87
Escherichia coli BL21 0.78 ECD_01970 suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein 0.96 ECD_03063 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 61
Escherichia coli BW25113 0.78 b2064 asmA predicted assembly protein (NCBI) 0.96 b3198 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) low > 76
Escherichia coli ECRC62 0.78 BNILDI_14530 asmA outer membrane assembly protein AsmA 0.96 BNILDI_01775 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Escherichia coli ECOR27 0.78 NOLOHH_15620 asmA outer membrane assembly protein AsmA 0.96 NOLOHH_09760 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Escherichia fergusonii Becca 0.78 EFB2_01790 hypothetical protein 0.96 EFB2_00625 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 86
Escherichia coli ECOR38 0.78 HEPCGN_02980 asmA outer membrane assembly protein AsmA 0.96 HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_01642 hypothetical protein 0.96 OHPLBJKB_00502 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 73
Enterobacter sp. TBS_079 0.70 MPMX20_03046 hypothetical protein 0.91 MPMX20_04104 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 85
Enterobacter asburiae PDN3 0.68 EX28DRAFT_0490 Uncharacterized protein involved in outer membrane biogenesis 0.91 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family low > 76
Klebsiella michiganensis M5al 0.64 BWI76_RS19115 outer membrane assembly protein AsmA 0.82 BWI76_RS25245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 92
Pectobacterium carotovorum WPP14 0.48 HER17_RS14640 outer membrane assembly protein AsmA 0.78 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Serratia liquefaciens MT49 0.44 IAI46_07985 outer membrane assembly protein AsmA 0.74 IAI46_22450 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 86
Dickeya dadantii 3937 0.43 DDA3937_RS06700 outer membrane assembly protein AsmA 0.75 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 74
Dickeya dianthicola 67-19 0.43 HGI48_RS06715 outer membrane assembly protein AsmA 0.75 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 71
Erwinia tracheiphila SCR3 0.43 LU632_RS08750 asmA outer membrane assembly protein AsmA 0.77 LU632_RS21260 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 74
Dickeya dianthicola ME23 0.43 DZA65_RS07070 outer membrane assembly protein AsmA 0.75 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Pantoea sp. MT58 0.42 IAI47_06915 outer membrane assembly protein AsmA 0.79 IAI47_17165 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.45 53
Rahnella sp. WP5 0.40 EX31_RS11535 outer membrane assembly protein AsmA 0.76 EX31_RS12420 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 89
Vibrio cholerae E7946 ATCC 55056 0.10 CSW01_05285 AsmA family protein 0.62 CSW01_12795 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Shewanella amazonensis SB2B 0.09 Sama_1887 AsmA protein (RefSeq) 0.53 Sama_3084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
Shewanella sp. ANA-3 0.09 Shewana3_2372 AsmA protein (RefSeq) 0.51 Shewana3_0676 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
Shewanella oneidensis MR-1 0.09 SO2566 asmA asmA protein (NCBI ptt file) 0.50 SO3957 conserved hypothetical protein (NCBI ptt file)
Shewanella loihica PV-4 0.07 Shew_2116 AsmA family protein (RefSeq) 0.58 Shew_3307 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
Kangiella aquimarina DSM 16071 0.07 B158DRAFT_1922 Uncharacterized protein involved in outer membrane biogenesis 0.52 B158DRAFT_2084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Not shown: 1 genomes with orthologs for GFF3863 only; 52 genomes with orthologs for GFF2942 only