Conservation of cofitness between GFF3103 and GFF2761 in Variovorax sp. SCN45

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF3103 Cys-tRNA(Pro) deacylase YbaK 1.0 GFF2761 Glutamine ABC transporter, permease protein GlnP 0.56 5
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_04124 Cys-tRNA(Pro) deacylase 0.81 H281DRAFT_02614 L-glutamine ABC transporter membrane protein low > 103
Paraburkholderia graminis OAS925 0.74 ABIE53_003359 Cys-tRNA(Pro) deacylase 0.67 ABIE53_004513 glutamine transport system permease protein low > 113
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS02765 Cys-tRNA(Pro) deacylase 0.82 QEN71_RS33760 glutamine ABC transporter permease GlnP low > 153
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS04270 membrane protein 0.83 HSERO_RS17545 glutamine ABC transporter permease low > 78
Ralstonia solanacearum PSI07 0.66 RPSI07_RS12155 Cys-tRNA(Pro) deacylase 0.82 RPSI07_RS14110 glutamine ABC transporter permease GlnP low > 81
Serratia liquefaciens MT49 0.26 IAI46_05300 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 IAI46_07530 glutamine ABC transporter permease GlnP low > 86
Escherichia fergusonii Becca 0.26 EFB2_03577 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 EFB2_03295 Glutamine transport system permease protein GlnP low > 86
Escherichia coli Nissle 1917 0.26 ECOLIN_RS02850 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 ECOLIN_RS04315 glutamine ABC transporter permease GlnP — —
Escherichia coli BW25113 0.26 b0481 ybaK hypothetical protein (NCBI) 0.62 b0810 glnP glutamine ABC transporter permease protein (NCBI) low > 76
Escherichia coli BL21 0.26 ECD_00432 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase 0.62 ECD_00777 glutamine transporter subunit low > 61
Escherichia coli ECOR27 0.26 NOLOHH_01035 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 NOLOHH_22565 glnP glutamine ABC transporter permease GlnP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03193 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 OHPLBJKB_02903 Glutamine transport system permease protein GlnP low > 73
Escherichia coli ECRC62 0.26 BNILDI_22455 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 BNILDI_20845 glnP glutamine ABC transporter permease GlnP low > 75
Escherichia coli ECOR38 0.26 HEPCGN_06725 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 HEPCGN_01825 glnP glutamine ABC transporter permease GlnP low > 87
Pantoea sp. MT58 0.26 IAI47_14410 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.63 IAI47_13205 glutamine ABC transporter permease GlnP low > 76
Rahnella sp. WP5 0.25 EX31_RS22565 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.61 EX31_RS18980 glutamine ABC transporter permease GlnP low > 89
Escherichia coli ECRC99 0.25 KEDOAH_19865 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 KEDOAH_21695 glnP glutamine ABC transporter permease GlnP — —
Escherichia coli ECRC102 0.25 NIAGMN_06155 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 NIAGMN_04260 glnP glutamine ABC transporter permease GlnP — —
Escherichia coli ECRC100 0.25 OKFHMN_08105 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 OKFHMN_06215 glnP glutamine ABC transporter permease GlnP low > 80
Escherichia coli ECRC98 0.25 JDDGAC_11750 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 JDDGAC_09850 glnP glutamine ABC transporter permease GlnP low > 86
Escherichia coli ECRC101 0.25 MCAODC_27325 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.62 MCAODC_25430 glnP glutamine ABC transporter permease GlnP low > 87
Klebsiella michiganensis M5al 0.24 BWI76_RS06870 aminoacyl-tRNA deacylase 0.61 BWI76_RS08970 glutamine ABC transporter permease GlnP low > 92
Erwinia tracheiphila SCR3 0.24 LU632_RS15310 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.59 LU632_RS09450 glnP glutamine ABC transporter permease GlnP low > 74
Pectobacterium carotovorum WPP14 0.24 HER17_RS15635 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.56 HER17_RS13070 glutamine ABC transporter permease GlnP low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF4401 Cys-tRNA(Pro) deacylase YbaK 0.60 GFF705 Glutamate transport membrane-spanning protein low > 78
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2477 Cys-tRNA(Pro) deacylase 0.61 EX28DRAFT_2180 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Desulfovibrio vulgaris Miyazaki F 0.23 DvMF_2065 ybaK/ebsC protein (RefSeq) 0.52 DvMF_1919 polar amino acid ABC transporter, inner membrane subunit (RefSeq) low > 51
Azospirillum sp. SherDot2 0.22 MPMX19_02507 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.33 MPMX19_05098 Arginine transport system permease protein ArtQ low > 112
Enterobacter sp. TBS_079 0.22 MPMX20_01082 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.61 MPMX20_01439 Glutamine transport system permease protein GlnP low > 85
Marinobacter adhaerens HP15 0.20 HP15_3802 conserved hypothetical protein CHP00011 0.49 HP15_2919 amino acid ABC transporter, permease protein low > 73

Not shown: 47 genomes with orthologs for GFF3103 only; 4 genomes with orthologs for GFF2761 only