Conservation of cofitness between GFF2897 and GFF238 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2897 HTH-type transcriptional regulator IlvY 1.0 GFF238 Protein of unknown function DUF484 0.32 16
Escherichia coli BL21 0.95 ECD_03651 transcriptional activator of ilvC; autorepressor 0.86 ECD_03686 DUF484 family protein low > 61
Escherichia coli BW25113 0.95 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) 0.86 b3810 yigA hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 0.95 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY 0.86 BNILDI_04980 yigA Uncharacterized protein YigA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_04280 HTH-type transcriptional regulator GltC 0.86 OHPLBJKB_04240 hypothetical protein low > 73
Escherichia fergusonii Becca 0.95 EFB2_04863 HTH-type transcriptional regulator HdfR 0.85 EFB2_04827 hypothetical protein low > 86
Escherichia coli ECRC98 0.94 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY 0.85 JDDGAC_18050 yigA Uncharacterized protein YigA low > 86
Escherichia coli ECRC100 0.94 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY 0.85 OKFHMN_14425 yigA Uncharacterized protein YigA 0.84 80
Escherichia coli ECRC102 0.94 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY 0.85 NIAGMN_12180 yigA Uncharacterized protein YigA
Escherichia coli ECRC101 0.94 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY 0.86 MCAODC_04930 yigA Uncharacterized protein YigA low > 87
Escherichia coli ECRC99 0.94 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY 0.85 KEDOAH_13725 yigA Uncharacterized protein YigA
Escherichia coli Nissle 1917 0.94 ECOLIN_RS21675 HTH-type transcriptional activator IlvY 0.86 ECOLIN_RS21870 DUF484 domain-containing protein low > 55
Escherichia coli ECOR38 0.94 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY 0.86 HEPCGN_13130 yigA Uncharacterized protein YigA low > 87
Escherichia coli ECOR27 0.94 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY 0.86 NOLOHH_06555 yigA Uncharacterized protein YigA low > 75
Enterobacter sp. TBS_079 0.93 MPMX20_04497 HTH-type transcriptional regulator GltC 0.84 MPMX20_04466 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4445 Transcriptional regulator 0.84 EX28DRAFT_4479 Uncharacterized protein conserved in bacteria low > 76
Klebsiella michiganensis M5al 0.93 BWI76_RS00985 transcriptional regulator IlvY 0.75 BWI76_RS01205 DUF484 family protein low > 92
Erwinia tracheiphila SCR3 0.77 LU632_RS24390 ilvY HTH-type transcriptional activator IlvY 0.60 LU632_RS24140 DUF484 domain-containing protein
Rahnella sp. WP5 0.75 EX31_RS15015 HTH-type transcriptional activator IlvY 0.58 EX31_RS15160 DUF484 domain-containing protein low > 89
Pantoea sp. MT58 0.72 IAI47_01045 HTH-type transcriptional activator IlvY 0.67 IAI47_18405 DUF484 domain-containing protein low > 76
Serratia liquefaciens MT49 0.72 IAI46_24330 HTH-type transcriptional activator IlvY 0.64 IAI46_00720 DUF484 domain-containing protein low > 86
Pectobacterium carotovorum WPP14 0.71 HER17_RS01095 HTH-type transcriptional activator IlvY 0.64 HER17_RS01345 DUF484 domain-containing protein low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS20135 HTH-type transcriptional activator IlvY 0.63 DDA3937_RS19895 DUF484 domain-containing protein low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS20275 HTH-type transcriptional activator IlvY 0.61 HGI48_RS20050 DUF484 domain-containing protein low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS21315 HTH-type transcriptional activator IlvY 0.61 DZA65_RS21095 DUF484 domain-containing protein low > 75
Shewanella sp. ANA-3 0.53 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) 0.12 Shewana3_0392 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.52 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) 0.13 SO4307 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.51 Shew_0287 DNA-binding transcriptional regulator IlvY (RefSeq) 0.14 Shew_0324 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.47 Sama_3283 DNA-binding transcriptional regulator IlvY (RefSeq) 0.16 Sama_3248 hypothetical protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_00835 HTH-type transcriptional activator IlvY 0.18 CSW01_00645 DUF484 domain-containing protein low > 62
Alteromonas macleodii MIT1002 0.41 MIT1002_04044 HTH-type transcriptional regulator GltC 0.14 MIT1002_00158 hypothetical protein low > 70
Pseudomonas sp. S08-1 0.40 OH686_08120 Transcriptional regulator IlvY, LysR family 0.17 OH686_13790 Protein of unknown function DUF484 low > 80

Not shown: 4 genomes with orthologs for GFF2897 only; 19 genomes with orthologs for GFF238 only