Conservation of cofitness between PGA1_c05650 and PGA1_c23250 in Phaeobacter inhibens DSM 17395

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c05650 tRNA pseudouridine synthase A 1.0 PGA1_c23250 transcriptional regulator, DeoR family 0.35 13
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_0647 tRNA pseudouridine(38-40) synthase 0.17 Ga0059261_2626 transcriptional regulator, DeoR family low > 68
Rhodospirillum rubrum S1H 0.47 Rru_A3352 Pseudouridylate synthase (NCBI) 0.17 Rru_A3010 Transcriptional Regulator, DeoR family (NCBI) — —
Bosea sp. OAE506 0.41 ABIE41_RS00165 tRNA pseudouridine(38-40) synthase TruA 0.17 ABIE41_RS02380 DeoR/GlpR family DNA-binding transcription regulator — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS17635 tRNA pseudouridine(38-40) synthase TruA 0.28 QEN71_RS08675 DeoR/GlpR family DNA-binding transcription regulator — —
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS33885 tRNA pseudouridine synthase A 0.29 BPHYT_RS24770 DeoR family transcriptional regulator low > 109
Paraburkholderia graminis OAS925 0.32 ABIE53_004807 tRNA pseudouridine38-40 synthase 0.30 ABIE53_006211 DeoR family glycerol-3-phosphate regulon repressor low > 113
Phocaeicola dorei CL03T12C01 0.29 ABI39_RS12690 tRNA pseudouridine(38-40) synthase TruA 0.16 ABI39_RS01995 DeoR/GlpR transcriptional regulator — —
Shewanella loihica PV-4 0.29 Shew_2306 tRNA pseudouridine synthase A (RefSeq) 0.14 Shew_3840 DeoR family transcriptional regulator (RefSeq) — —
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS16775 tRNA pseudouridine(38-40) synthase TruA 0.16 HMPREF1058_RS02715 DeoR/GlpR transcriptional regulator low > 67
Shewanella sp. ANA-3 0.27 Shewana3_1479 truA tRNA pseudouridine synthase A (RefSeq) 0.20 Shewana3_2702 DeoR family transcriptional regulator (RefSeq) low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_17725 tRNA pseudouridine synthase A 0.17 CA264_11465 transcriptional regulator low > 74
Rhodanobacter denitrificans MT42 0.24 LRK55_RS01480 tRNA pseudouridine(38-40) synthase TruA 0.20 LRK55_RS11180 transcriptional repressor AgaR low > 63
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS01700 tRNA pseudouridine(38-40) synthase TruA 0.20 LRK54_RS11450 transcriptional repressor AgaR low > 59
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS21140 tRNA pseudouridine(38-40) synthase TruA 0.19 ABZR88_RS15195 DeoR/GlpR family DNA-binding transcription regulator — —
Fusobacterium nucleatum SB010 0.19 HUW76_09850 tRNA pseudouridine(38-40) synthase TruA 0.16 HUW76_01930 DeoR/GlpR transcriptional regulator low > 35

Not shown: 85 genomes with orthologs for PGA1_c05650 only; 0 genomes with orthologs for PGA1_c23250 only