Conservation of cofitness between PS417_14900 and PS417_11040 in Pseudomonas simiae WCS417

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_14900 C4-dicarboxylate ABC transporter permease 1.0 PS417_11040 aldose epimerase 0.17 14
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS16920 TRAP transporter large permease 0.97 PFLU_RS11665 galactose mutarotase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS16920 TRAP transporter large permease 0.97 PFLU_RS11665 galactose mutarotase low > 109
Pseudomonas sp. RS175 0.83 PFR28_00121 C4-dicarboxylate TRAP transporter large permease protein DctM 0.79 PFR28_01305 Aldose 1-epimerase low > 88
Pseudomonas sp. DMC3 0.80 GFF1144 C4-dicarboxylate TRAP transporter large permease protein DctM 0.79 GFF1407 Aldose 1-epimerase low > 89
Shewanella oneidensis MR-1 0.61 SO3136 dctM C4-dicarboxylate transport protein (NCBI ptt file) 0.26 SO0693 galM aldose 1-epimerase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_09640 C4-dicarboxylate ABC transporter permease 0.28 CSW01_07995 galactose-1-epimerase low > 62
Shewanella sp. ANA-3 0.58 Shewana3_1414 TRAP dicarboxylate transporter, DctM subunit (RefSeq) 0.28 Shewana3_2072 L-arabinose 1-epimerase (mutarotase) (EC 5.1.3.3) (from data) low > 73
Shewanella amazonensis SB2B 0.56 Sama_2211 alpha-ketoglutarate TRAP transporter, large permease component (from data) 0.31 Sama_0535 Aldose 1-epimerase (EC 5.1.3.3) (from data) low > 62
Shewanella loihica PV-4 0.56 Shew_1444 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), large permease component (from data) 0.27 Shew_3272 Aldose 1-epimerase (EC 5.1.3.3) (from data) low > 60
Azospirillum brasilense Sp245 0.55 AZOBR_RS09595 C4-dicarboxylate ABC transporter permease 0.35 AZOBR_RS31270 aldose 1-epimerase low > 97
Phaeobacter inhibens DSM 17395 0.55 PGA1_c20660 TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) 0.21 PGA1_262p00390 aldose 1-epimerase low > 62
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS04250 C4-dicarboxylate ABC transporter permease 0.36 HSERO_RS22450 aldose 1-epimerase low > 78
Azospirillum sp. SherDot2 0.51 MPMX19_00661 C4-dicarboxylate TRAP transporter large permease protein DctM 0.35 MPMX19_06214 Aldose 1-epimerase low > 112
Acidovorax sp. GW101-3H11 0.38 Ac3H11_163 TRAP-type C4-dicarboxylate transport system, large permease component 0.25 Ac3H11_3951 Aldose 1-epimerase (EC 5.1.3.3) low > 79
Variovorax sp. SCN45 0.38 GFF6470 TRAP-type C4-dicarboxylate transport system, large permease component 0.42 GFF5187 Aldose 1-epimerase (EC 5.1.3.3) low > 127
Variovorax sp. OAS795 0.35 ABID97_RS19635 TRAP transporter large permease 0.41 ABID97_RS06780 aldose epimerase family protein low > 91
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS36140 TRAP transporter large permease 0.32 QEN71_RS25885 aldose epimerase family protein low > 153

Not shown: 13 genomes with orthologs for PS417_14900 only; 64 genomes with orthologs for PS417_11040 only