Conservation of cofitness between GFF1815 and GFF2110 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1815 Electron transport complex protein RnfA 1.0 GFF2110 Sigma factor RpoE regulatory protein RseC 0.86 7
Escherichia coli ECOR38 0.98 HEPCGN_05940 rsxA electron transport complex subunit RsxA 0.83 HEPCGN_20540 rseC SoxR-reducing system protein RseC 0.83 63
Escherichia coli Nissle 1917 0.98 ECOLIN_RS09080 electron transport complex subunit RsxA 0.82 ECOLIN_RS14545 SoxR-reducing system protein RseC
Escherichia coli ECRC62 0.98 BNILDI_16865 rsxA electron transport complex subunit RsxA 0.83 BNILDI_11870 rseC SoxR-reducing system protein RseC
Escherichia coli ECOR27 0.98 NOLOHH_18075 rsxA electron transport complex subunit RsxA 0.83 NOLOHH_13070 rseC SoxR-reducing system protein RseC
Escherichia coli ECRC101 0.98 MCAODC_17855 rsxA electron transport complex subunit RsxA 0.83 MCAODC_11925 rseC SoxR-reducing system protein RseC 0.67 7
Escherichia coli ECRC98 0.98 JDDGAC_02145 rsxA electron transport complex subunit RsxA 0.83 JDDGAC_25060 rseC SoxR-reducing system protein RseC 0.75 51
Escherichia coli BW25113 0.98 b1627 rsxA Na(+)-translocating NADH-quinone reductase subunit E (NCBI) 0.83 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 0.64 6
Escherichia fergusonii Becca 0.98 EFB2_02365 Ion-translocating oxidoreductase complex subunit A 0.83 EFB2_01326 Protein RseC low > 86
Escherichia coli ECRC100 0.98 OKFHMN_27555 rsxA electron transport complex subunit RsxA 0.83 OKFHMN_21395 rseC SoxR-reducing system protein RseC low > 80
Escherichia coli ECRC99 0.98 KEDOAH_00550 rsxA electron transport complex subunit RsxA 0.83 KEDOAH_06830 rseC SoxR-reducing system protein RseC
Escherichia coli BL21 0.98 ECD_01597 SoxR iron-sulfur cluster reduction factor component; inner membrane protein of electron transport complex 0.83 ECD_02464 SoxR iron-sulfur cluster reduction factor component
Escherichia coli ECRC102 0.98 NIAGMN_00510 rsxA electron transport complex subunit RsxA 0.83 NIAGMN_19165 rseC SoxR-reducing system protein RseC
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_02099 Electron transport complex subunit RsxA 0.83 OHPLBJKB_01137 Protein RseC low > 73
Enterobacter sp. TBS_079 0.97 MPMX20_02011 Ion-translocating oxidoreductase complex subunit A 0.73 MPMX20_03441 Protein RseC 0.51 45
Klebsiella michiganensis M5al 0.97 BWI76_RS16355 electron transport complex subunit A 0.76 BWI76_RS21340 SoxR reducing system protein RseC 0.29 12
Enterobacter asburiae PDN3 0.97 EX28DRAFT_1623 electron transport complex, RnfABCDGE type, A subunit 0.74 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.79 19
Serratia liquefaciens MT49 0.91 IAI46_11490 electron transport complex subunit RsxA 0.49 IAI46_19570 SoxR-reducing system protein RseC 0.44 23
Erwinia tracheiphila SCR3 0.88 LU632_RS11335 rsxA electron transport complex subunit RsxA 0.59 LU632_RS15410 rseC SoxR-reducing system protein RseC
Pantoea sp. MT58 0.88 IAI47_10445 electron transport complex subunit RsxA 0.65 IAI47_04865 SoxR-reducing system protein RseC
Rahnella sp. WP5 0.87 EX31_RS06620 electron transport complex subunit RsxA 0.55 EX31_RS21815 SoxR-reducing system protein RseC low > 89
Pectobacterium carotovorum WPP14 0.83 HER17_RS10830 electron transport complex subunit RsxA 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.87 3
Dickeya dadantii 3937 0.82 DDA3937_RS10575 electron transport complex subunit RsxA 0.42 DDA3937_RS15750 SoxR-reducing system protein RseC low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS11055 electron transport complex subunit RsxA 0.40 DZA65_RS16915 SoxR-reducing system protein RseC
Dickeya dianthicola 67-19 0.82 HGI48_RS10575 electron transport complex subunit RsxA 0.41 HGI48_RS15835 SoxR-reducing system protein RseC
Alteromonas macleodii MIT1002 0.80 MIT1002_01257 Electron transport complex protein RnfA 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC
Shewanella oneidensis MR-1 0.80 SO2508 RnfAE/NqrDE family protein (NCBI ptt file) 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file)
Shewanella amazonensis SB2B 0.79 Sama_1830 Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) 0.16 Sama_0877 sigma-E factor regulatory protein RseC (RefSeq)
Kangiella aquimarina DSM 16071 0.79 B158DRAFT_2371 electron transport complex, RnfABCDGE type, A subunit 0.20 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC
Marinobacter adhaerens HP15 0.78 HP15_1291 electron transport complex, RnfA 0.21 HP15_778 positive regulator of sigma E, RseC/MucC
Shewanella loihica PV-4 0.76 Shew_2066 Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) 0.21 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq)
Pseudomonas stutzeri RCH2 0.72 Psest_3112 electron transport complex, RnfABCDGE type, A subunit 0.18 Psest_3097 Positive regulator of sigma E activity

Not shown: 20 genomes with orthologs for GFF1815 only; 0 genomes with orthologs for GFF2110 only