Conservation of cofitness between GFF517 and GFF1899 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF517 Oligopeptidase A (EC 3.4.24.70) 1.0 GFF1899 FIG00638298: membrane protein YfbV 0.53 13
Escherichia coli ECOR38 0.94 HEPCGN_15325 prlC oligopeptidase A 0.97 HEPCGN_22005 yfbV UPF0208 membrane protein YfbV low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_00205 Oligopeptidase A 0.97 OHPLBJKB_01410 hypothetical protein low > 73
Escherichia coli BW25113 0.94 b3498 prlC oligopeptidase A (NCBI) 0.97 b2295 yfbV hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.94 EFB2_00317 Oligopeptidase A 0.97 EFB2_01563 hypothetical protein low > 86
Escherichia coli ECRC99 0.94 KEDOAH_11730 prlC oligopeptidase A 0.97 KEDOAH_05395 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECRC98 0.94 JDDGAC_20045 prlC oligopeptidase A 0.97 JDDGAC_26765 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECRC102 0.94 NIAGMN_14180 prlC oligopeptidase A 0.97 NIAGMN_20570 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECRC101 0.94 OKFHMN_16415 prlC oligopeptidase A 0.97 OKFHMN_22800 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECRC101 0.94 MCAODC_06930 prlC oligopeptidase A 0.97 MCAODC_13840 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli Nissle 1917 0.94 ECOLIN_RS19985 oligopeptidase A 0.96 ECOLIN_RS13320 terminus macrodomain insulation protein YfbV — —
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.95 EX28DRAFT_0314 Uncharacterized protein conserved in bacteria low > 76
Escherichia coli ECRC62 0.93 BNILDI_03210 prlC oligopeptidase A 0.97 BNILDI_13340 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli BL21 0.93 ECD_03347 oligopeptidase A 0.97 ECD_02220 UPF0208 family inner membrane protein — —
Escherichia coli ECOR27 0.93 NOLOHH_08350 prlC oligopeptidase A 0.97 NOLOHH_14420 yfbV UPF0208 membrane protein YfbV — —
Enterobacter sp. TBS_079 0.93 MPMX20_04397 Oligopeptidase A 0.95 MPMX20_03225 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26610 oligopeptidase A 0.93 BWI76_RS20230 hypothetical protein low > 92
Pantoea sp. MT58 0.87 IAI47_01345 oligopeptidase A 0.79 IAI47_06330 DUF412 domain-containing protein low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS19470 prlC oligopeptidase A 0.73 LU632_RS07930 DUF412 domain-containing protein low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS21300 oligopeptidase A 0.73 HER17_RS07090 DUF412 domain-containing protein low > 75
Dickeya dianthicola ME23 0.83 DZA65_RS00035 oligopeptidase A 0.74 DZA65_RS15270 DUF412 domain-containing protein low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS21265 oligopeptidase A 0.75 DDA3937_RS14370 DUF412 domain-containing protein low > 74
Serratia liquefaciens MT49 0.83 IAI46_24210 oligopeptidase A 0.78 IAI46_17745 DUF412 domain-containing protein low > 86
Dickeya dianthicola 67-19 0.82 HGI48_RS00045 oligopeptidase A 0.74 HGI48_RS14345 DUF412 domain-containing protein low > 71
Rahnella sp. WP5 0.82 EX31_RS05165 oligopeptidase A 0.74 EX31_RS19470 DUF412 domain-containing protein low > 89
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_01010 oligopeptidase A 0.44 CSW01_05585 DUF412 domain-containing protein low > 62
Shewanella loihica PV-4 0.67 Shew_3657 oligopeptidase A (RefSeq) 0.32 Shew_2392 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.31 SO2914 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_3546 oligopeptidase A (RefSeq) 0.36 Sama_1496 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_4051 oligopeptidase A (RefSeq) 0.31 Shewana3_1553 hypothetical protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.64 MIT1002_03633 Oligopeptidase A 0.37 MIT1002_01839 hypothetical protein low > 70

Not shown: 45 genomes with orthologs for GFF517 only; 0 genomes with orthologs for GFF1899 only