Conservation of cofitness between PS417_23625 and PS417_09300 in Pseudomonas simiae WCS417

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23625 LysR family transcriptional regulator 1.0 PS417_09300 peptidylprolyl isomerase 0.16 19
Pseudomonas fluorescens SBW25 0.95 PFLU_RS25440 LysR family transcriptional regulator 0.99 PFLU_RS09955 FKBP-type peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS25440 LysR family transcriptional regulator 0.99 PFLU_RS09955 FKBP-type peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_05905 LysR family transcriptional regulator 0.92 AO353_02480 peptidylprolyl isomerase low > 101
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_3445 Transcriptional regulator, LysR family 0.91 Pf6N2E2_5771 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) low > 103
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_07805 LysR family transcriptional regulator 0.91 AO356_19300 peptidylprolyl isomerase low > 104
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_1207 Transcriptional regulator, LysR family 0.91 Pf1N1B4_3734 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_5137 Transcriptional regulator, LysR family 0.91 PfGW456L13_4213 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) low > 87
Pseudomonas sp. RS175 0.81 PFR28_00026 HTH-type transcriptional regulator DmlR 0.90 PFR28_03175 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase low > 88
Pseudomonas putida KT2440 0.76 PP_4660 Transcriptional regulator, LysR family 0.79 PP_1714 FKBP-type peptidyl-prolyl cis-trans isomerase low > 96
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS17240 LysR family transcriptional regulator 0.29 ABZR86_RS07215 FKBP-type peptidyl-prolyl cis-trans isomerase low > 74
Pseudomonas sp. S08-1 0.53 OH686_12450 Transcriptional regulator, LysR family 0.85 OH686_19655 FKBP-type peptidyl-prolyl cis-trans isomerase FklB low > 80
Pseudomonas stutzeri RCH2 0.52 Psest_0042 Transcriptional regulator 0.77 Psest_1535 FKBP-type peptidyl-prolyl cis-trans isomerases 1
Marinobacter adhaerens HP15 0.49 HP15_2718 transcriptional regulator, LysR family protein 0.35 HP15_223 peptidylprolyl isomerase, FKBP-type low > 73
Acinetobacter radioresistens SK82 0.45 MPMX26_03002 HTH-type transcriptional regulator DmlR 0.35 MPMX26_00046 putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA low > 36
Escherichia coli BW25113 0.43 b0208 yafC predicted DNA-binding transcriptional regulator (NCBI) 0.38 b4207 fklB FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) (VIMSS) low > 76
Escherichia coli ECRC62 0.43 BNILDI_09325 yafC DNA-binding transcriptional regulator YafC 0.38 BNILDI_07185 fklB FKBP-type peptidyl-prolyl cis-trans isomerase low > 75
Escherichia coli BL21 0.43 ECD_00201 LysR family putative transcriptional regulator 0.38 ECD_04079 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) low > 61
Escherichia coli ECOR27 0.42 NOLOHH_02345 yafC DNA-binding transcriptional regulator YafC 0.38 NOLOHH_04335 fklB FKBP-type peptidyl-prolyl cis-trans isomerase low > 75
Escherichia coli ECRC100 0.42 OKFHMN_10000 yafC DNA-binding transcriptional regulator YafC 0.38 OKFHMN_12075 fklB FKBP-type peptidyl-prolyl cis-trans isomerase low > 80
Escherichia coli ECRC102 0.42 NIAGMN_07850 yafC DNA-binding transcriptional regulator YafC 0.38 NIAGMN_09925 fklB FKBP-type peptidyl-prolyl cis-trans isomerase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_03453 HTH-type transcriptional regulator DmlR 0.38 OHPLBJKB_03828 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase low > 73
Escherichia coli ECRC101 0.42 MCAODC_00515 yafC DNA-binding transcriptional regulator YafC 0.38 MCAODC_02590 fklB FKBP-type peptidyl-prolyl cis-trans isomerase low > 87
Escherichia coli ECRC98 0.42 JDDGAC_13595 yafC DNA-binding transcriptional regulator YafC 0.38 JDDGAC_15715 fklB FKBP-type peptidyl-prolyl cis-trans isomerase low > 86
Escherichia coli ECRC99 0.42 KEDOAH_18155 yafC DNA-binding transcriptional regulator YafC 0.38 KEDOAH_16080 fklB FKBP-type peptidyl-prolyl cis-trans isomerase
Escherichia coli ECOR38 0.42 HEPCGN_07940 yafC DNA-binding transcriptional regulator YafC 0.38 HEPCGN_10280 fklB FKBP-type peptidyl-prolyl cis-trans isomerase low > 87
Enterobacter asburiae PDN3 0.42 EX28DRAFT_2687 Transcriptional regulator 0.38 EX28DRAFT_3390 FKBP-type peptidyl-prolyl cis-trans isomerases 1 low > 76
Escherichia coli Nissle 1917 0.42 ECOLIN_RS01140 DNA-binding transcriptional regulator YafC 0.39 ECOLIN_RS24445 FKBP-type peptidyl-prolyl cis-trans isomerase low > 55
Escherichia fergusonii Becca 0.42 EFB2_03835 HTH-type transcriptional regulator DmlR 0.39 EFB2_04321 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase low > 86
Enterobacter sp. TBS_079 0.41 MPMX20_00892 HTH-type transcriptional regulator DmlR 0.37 MPMX20_00483 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase low > 85

Not shown: 25 genomes with orthologs for PS417_23625 only; 6 genomes with orthologs for PS417_09300 only