Conservation of cofitness between HP15_861 and HP15_1475 in Marinobacter adhaerens HP15

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_861 cold shock, CspA 1.0 HP15_1475 flagellar rod assembly protein/muramidase FlgJ 0.77 1
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_14910 cold-shock protein 0.29 CSW01_11185 flagellar assembly peptidoglycan hydrolase FlgJ low > 62
Shewanella loihica PV-4 0.67 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq) 0.32 Shew_1353 flgJ peptidoglycan hydrolase (RefSeq) — —
Shewanella sp. ANA-3 0.67 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq) 0.31 Shewana3_1329 flgJ flagellar rod assembly protein/muramidase FlgJ (RefSeq) — —
Shewanella oneidensis MR-1 0.67 SO2787 cold shock domain family protein (NCBI ptt file) 0.31 SO3241 flgJ flagellar protein FlgJ (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.65 Sama_1970 cold-shock DNA-binding domain-containing protein (RefSeq) 0.30 Sama_2310 flgJ flagellar rod assembly protein/muramidase FlgJ (RefSeq) — —
Enterobacter sp. TBS_079 0.65 MPMX20_01283 Cold shock-like protein CspE 0.26 MPMX20_01760 Peptidoglycan hydrolase FlgJ low > 85
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2340 Cold shock proteins 0.25 EX28DRAFT_1851 flagellar rod assembly protein/muramidase FlgJ — —
Escherichia fergusonii Becca 0.65 EFB2_03468 Cold shock-like protein CspE 0.28 EFB2_02893 Peptidoglycan hydrolase FlgJ low > 86
Escherichia coli BW25113 0.65 b0623 cspE cold shock protein E (NCBI) 0.28 b1081 flgJ flagellar biosynthesis protein FlgJ (NCBI) low > 76
Escherichia coli Nissle 1917 0.65 ECOLIN_RS03400 transcription antiterminator/RNA stability regulator CspE 0.28 ECOLIN_RS06255 flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia coli ECOR27 0.65 NOLOHH_23795 cspE transcription antiterminator/RNA stability regulator CspE 0.28 NOLOHH_21165 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_03082 Cold shock-like protein CspE 0.28 OHPLBJKB_02584 Peptidoglycan hydrolase FlgJ low > 73
Escherichia coli ECRC101 0.65 MCAODC_26635 cspE transcription antiterminator/RNA stability regulator CspE 0.28 MCAODC_22995 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Pantoea sp. MT58 0.65 IAI47_14075 transcription antiterminator/RNA stability regulator CspE 0.26 IAI47_12125 flagellar assembly peptidoglycan hydrolase FlgJ low > 76
Escherichia coli BL21 0.65 ECD_00593 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein 0.28 ECD_01077 flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase low > 60
Escherichia coli ECRC102 0.65 NIAGMN_05475 cspE transcription antiterminator/RNA stability regulator CspE 0.28 NIAGMN_24195 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia coli ECRC101 0.65 OKFHMN_07420 cspE transcription antiterminator/RNA stability regulator CspE 0.28 OKFHMN_03635 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia coli ECRC98 0.65 JDDGAC_11065 cspE transcription antiterminator/RNA stability regulator CspE 0.28 JDDGAC_07295 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia coli ECRC99 0.65 KEDOAH_20550 cspE transcription antiterminator/RNA stability regulator CspE 0.28 KEDOAH_24120 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia coli ECRC62 0.65 BNILDI_21805 cspE transcription antiterminator/RNA stability regulator CspE 0.28 BNILDI_19325 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF4536 Cold shock protein CspE 0.27 GFF3362 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) — —
Dickeya dianthicola ME23 0.63 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE 0.24 DZA65_RS13970 flagellar assembly peptidoglycan hydrolase FlgJ low > 75
Dickeya dadantii 3937 0.63 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE 0.25 DDA3937_RS13440 flagellar assembly peptidoglycan hydrolase FlgJ — —
Dickeya dianthicola 67-19 0.63 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE 0.24 HGI48_RS13485 flagellar assembly peptidoglycan hydrolase FlgJ — —
Erwinia tracheiphila SCR3 0.63 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE 0.28 LU632_RS10435 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Rahnella sp. WP5 0.62 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE 0.27 EX31_RS11275 flagellar assembly peptidoglycan hydrolase FlgJ low > 89
Serratia liquefaciens MT49 0.62 IAI46_05870 transcription antiterminator/RNA stability regulator CspE 0.27 IAI46_15920 flagellar assembly peptidoglycan hydrolase FlgJ low > 86
Pectobacterium carotovorum WPP14 0.62 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE 0.25 HER17_RS08205 flagellar assembly peptidoglycan hydrolase FlgJ low > 75

Not shown: 9 genomes with orthologs for HP15_861 only; 25 genomes with orthologs for HP15_1475 only