Conservation of cofitness between Echvi_1181 and Echvi_2954 in Echinicola vietnamensis KMM 6221, DSM 17526

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Echinicola vietnamensis KMM 6221, DSM 17526 1.0 Echvi_1181 Uridine kinase 1.0 Echvi_2954 Nucleoside permease 0.77 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.67 CA264_19885 uridine kinase 0.73 CA264_08105 NupC/NupG family nucleoside CNT transporter 0.87 1
Alteromonas macleodii MIT1002 0.30 MIT1002_03498 Uridine kinase 0.35 MIT1002_03499 Nucleoside permease NupX low > 70
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_05280 uridine kinase 0.37 CSW01_14885 NupC/NupG family nucleoside CNT transporter low > 62
Shewanella loihica PV-4 0.27 Shew_1575 uridine kinase (RefSeq) 0.36 Shew_2817 nucleoside transporter (RefSeq) — —
Shewanella oneidensis MR-1 0.27 SO2617 udk uridine kinase (NCBI ptt file) 0.36 SO3706 NupC family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.27 Shewana3_1762 uridine kinase (RefSeq) 0.35 Shewana3_1039 nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) — —
Klebsiella michiganensis M5al 0.27 BWI76_RS19125 uridine kinase 0.35 BWI76_RS04125 NupC/NupG family nucleoside CNT transporter — —
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS07970 uridine kinase 0.26 A4249_RS09815 nucleoside transporter C-terminal domain-containing protein low > 48
Rahnella sp. WP5 0.26 EX31_RS11545 uridine kinase 0.17 EX31_RS20080 NupC/NupG family nucleoside CNT transporter low > 89
Shewanella amazonensis SB2B 0.26 Sama_2047 uridine kinase (RefSeq) 0.34 Sama_0971 nucleoside transporter (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.26 LU632_RS08740 udk uridine kinase 0.17 LU632_RS06530 NupC/NupG family nucleoside CNT transporter low > 74
Enterobacter asburiae PDN3 0.26 EX28DRAFT_0488 uridine kinase (EC 2.7.1.48) 0.17 EX28DRAFT_0231 nucleoside transporter low > 76
Enterobacter sp. TBS_079 0.26 MPMX20_03048 Uridine kinase 0.18 MPMX20_03287 Nucleoside permease NupC low > 85
Dickeya dianthicola ME23 0.25 DZA65_RS07060 uridine kinase 0.19 DZA65_RS16155 NupC/NupG family nucleoside CNT transporter low > 75
Dickeya dianthicola 67-19 0.25 HGI48_RS06705 uridine kinase 0.19 HGI48_RS15335 NupC/NupG family nucleoside CNT transporter low > 71
Escherichia fergusonii Becca 0.25 EFB2_01788 Uridine kinase 0.30 EFB2_01693 Putative pseudouridine transporter low > 86
Escherichia coli ECRC62 0.25 BNILDI_14520 udk uridine kinase 0.30 BNILDI_13970 nupX Putative nucleoside permease NupX — —
Escherichia coli ECRC101 0.25 OKFHMN_24270 udk uridine kinase 0.30 OKFHMN_23475 nupX Putative nucleoside permease NupX — —
Escherichia coli ECRC98 0.25 JDDGAC_28380 udk uridine kinase 0.30 JDDGAC_27435 nupX Putative nucleoside permease NupX — —
Escherichia coli ECOR38 0.25 HEPCGN_02970 udk uridine kinase 0.30 HEPCGN_22740 nupX Putative nucleoside permease NupX low > 85
Escherichia coli BL21 0.25 ECD_01972 uridine/cytidine kinase 0.29 ECD_02090 nucleoside permease low > 60
Pantoea sp. MT58 0.25 IAI47_06905 uridine kinase 0.17 IAI47_05530 NupC/NupG family nucleoside CNT transporter low > 76
Escherichia coli ECRC102 0.25 NIAGMN_22215 udk uridine kinase 0.30 NIAGMN_21240 nupX Putative nucleoside permease NupX — —
Escherichia coli BW25113 0.25 b2066 udk uridine/cytidine kinase (VIMSS) 0.30 b2161 yeiJ predicted nucleoside transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.25 ECOLIN_RS12160 uridine kinase 0.30 ECOLIN_RS12660 NupC/NupG family nucleoside CNT transporter low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_01640 Uridine kinase 0.30 OHPLBJKB_01550 Putative nucleoside permease NupX low > 73
Escherichia coli ECRC99 0.25 KEDOAH_03880 udk uridine kinase 0.30 KEDOAH_04710 nupX Putative nucleoside permease NupX — —
Escherichia coli ECRC101 0.25 MCAODC_20670 udk uridine kinase 0.30 MCAODC_14525 nupX Putative nucleoside permease NupX — —
Escherichia coli ECOR27 0.25 NOLOHH_15610 udk uridine kinase 0.30 NOLOHH_15035 psuT Putative pseudouridine transporter low > 57
Dickeya dadantii 3937 0.25 DDA3937_RS06690 uridine kinase 0.19 DDA3937_RS15255 NupC/NupG family nucleoside CNT transporter 0.58 40
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF3861 Uridine kinase (EC 2.7.1.48) [C1] 0.17 GFF1978 Nucleoside permease NupC low > 78
Pectobacterium carotovorum WPP14 0.25 HER17_RS14650 uridine kinase 0.31 HER17_RS19040 NupC/NupG family nucleoside CNT transporter low > 75
Serratia liquefaciens MT49 0.24 IAI46_07975 uridine kinase 0.34 IAI46_02905 NupC/NupG family nucleoside CNT transporter low > 86

Not shown: 7 genomes with orthologs for Echvi_1181 only; 10 genomes with orthologs for Echvi_2954 only