Conservation of cofitness between EX31_RS21460 and EX31_RS15015 in Rahnella sp. WP5

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21460 LysR family transcriptional regulator ArgP 1.0 EX31_RS15015 HTH-type transcriptional activator IlvY 0.78 19
Serratia liquefaciens MT49 0.93 IAI46_20910 LysR family transcriptional regulator ArgP 0.81 IAI46_24330 HTH-type transcriptional activator IlvY low > 86
Pantoea sp. MT58 0.92 IAI47_03715 LysR family transcriptional regulator ArgP 0.74 IAI47_01045 HTH-type transcriptional activator IlvY low > 76
Pectobacterium carotovorum WPP14 0.92 HER17_RS02715 LysR family transcriptional regulator ArgP 0.75 HER17_RS01095 HTH-type transcriptional activator IlvY 0.73 25
Dickeya dadantii 3937 0.91 DDA3937_RS18490 LysR family transcriptional regulator ArgP 0.73 DDA3937_RS20135 HTH-type transcriptional activator IlvY low > 74
Erwinia tracheiphila SCR3 0.91 LU632_RS05845 LysR family transcriptional regulator ArgP 0.81 LU632_RS24390 ilvY HTH-type transcriptional activator IlvY low > 74
Dickeya dianthicola 67-19 0.91 HGI48_RS18415 LysR family transcriptional regulator ArgP 0.74 HGI48_RS20275 HTH-type transcriptional activator IlvY low > 71
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2967 transcriptional regulator, ArgP family 0.73 EX28DRAFT_4445 Transcriptional regulator low > 76
Dickeya dianthicola ME23 0.91 DZA65_RS19550 LysR family transcriptional regulator ArgP 0.72 DZA65_RS21315 HTH-type transcriptional activator IlvY 0.48 66
Enterobacter sp. TBS_079 0.91 MPMX20_03773 HTH-type transcriptional regulator ArgP 0.73 MPMX20_04497 HTH-type transcriptional regulator GltC low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS23930 transcriptional regulator ArgP 0.72 BWI76_RS00985 transcriptional regulator IlvY 0.29 81
Escherichia coli BL21 0.90 ECD_02747 transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 0.74 ECD_03651 transcriptional activator of ilvC; autorepressor low > 61
Escherichia coli ECRC100 0.90 OKFHMN_19450 argP DNA-binding transcriptional regulator ArgP 0.73 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY low > 80
Escherichia coli Nissle 1917 0.90 ECOLIN_RS16225 DNA-binding transcriptional regulator ArgP 0.74 ECOLIN_RS21675 HTH-type transcriptional activator IlvY — —
Escherichia coli BW25113 0.90 b2916 argP chromosome replication initiation inhibitor protein (NCBI) 0.74 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECRC99 0.90 KEDOAH_08690 argP DNA-binding transcriptional regulator ArgP 0.73 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECOR27 0.90 NOLOHH_11355 argP DNA-binding transcriptional regulator ArgP 0.73 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY low > 75
Escherichia coli ECRC62 0.90 BNILDI_09890 argP DNA-binding transcriptional regulator ArgP 0.73 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_00800 HTH-type transcriptional regulator ArgP 0.74 OHPLBJKB_04280 HTH-type transcriptional regulator GltC low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3015 Chromosome initiation inhibitor 0.73 GFF2897 HTH-type transcriptional regulator IlvY low > 78
Escherichia coli ECRC101 0.90 MCAODC_09970 argP DNA-binding transcriptional regulator ArgP 0.73 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY low > 87
Escherichia coli ECRC102 0.90 NIAGMN_17215 argP DNA-binding transcriptional regulator ArgP 0.73 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECRC98 0.90 JDDGAC_23090 argP DNA-binding transcriptional regulator ArgP 0.73 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY low > 86
Escherichia coli ECOR38 0.90 HEPCGN_18750 argP DNA-binding transcriptional regulator ArgP 0.73 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY low > 87
Escherichia fergusonii Becca 0.90 EFB2_00987 HTH-type transcriptional regulator ArgP 0.74 EFB2_04863 HTH-type transcriptional regulator HdfR low > 86
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02560 chromosome initiation inhibitor 0.49 CSW01_00835 HTH-type transcriptional activator IlvY low > 62
Shewanella amazonensis SB2B 0.39 Sama_2987 chromosome replication initiation inhibitor protein (RefSeq) 0.53 Sama_3283 DNA-binding transcriptional regulator IlvY (RefSeq) low > 62
Shewanella loihica PV-4 0.34 Shew_1844 chromosome replication initiation inhibitor protein (RefSeq) 0.55 Shew_0287 DNA-binding transcriptional regulator IlvY (RefSeq) low > 60
Shewanella oneidensis MR-1 0.33 SO2866 iciA chromosome initiation inhibitor (NCBI ptt file) 0.56 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1652 chromosome replication initiation inhibitor protein (RefSeq) 0.56 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) low > 73
Pseudomonas sp. S08-1 0.29 OH686_07195 Transcriptional regulator ArgP, LysR family 0.42 OH686_08120 Transcriptional regulator IlvY, LysR family low > 80
Alteromonas macleodii MIT1002 0.25 MIT1002_00129 OriC replication inhibitor 0.42 MIT1002_04044 HTH-type transcriptional regulator GltC low > 70
Variovorax sp. SCN45 0.21 GFF2318 Transcriptional regulator ArgP, LysR family 0.18 GFF1571 Transcriptional regulator, LysR family low > 127

Not shown: 38 genomes with orthologs for EX31_RS21460 only; 2 genomes with orthologs for EX31_RS15015 only