Conservation of cofitness between EX31_RS23395 and EX31_RS14160 in Rahnella sp. WP5

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS23395 5-oxoprolinase subunit PxpA 1.0 EX31_RS14160 HTH-type transcriptional repressor FabR 0.40 20
Serratia liquefaciens MT49 0.77 IAI46_06225 5-oxoprolinase subunit PxpA 0.88 IAI46_24465 HTH-type transcriptional repressor FabR low > 86
Escherichia coli Nissle 1917 0.74 ECOLIN_RS03815 5-oxoprolinase subunit PxpA 0.87 ECOLIN_RS22890 HTH-type transcriptional repressor FabR low > 55
Escherichia fergusonii Becca 0.74 EFB2_03390 5-oxoprolinase subunit A 0.87 EFB2_04647 HTH-type transcriptional repressor FabR low > 86
Escherichia coli ECRC62 0.74 BNILDI_21375 pxpA 5-oxoprolinase subunit PxpA 0.88 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.61 53
Escherichia coli ECOR27 0.74 NOLOHH_23380 pxpA 5-oxoprolinase subunit PxpA 0.87 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03004 hypothetical protein 0.87 OHPLBJKB_04087 HTH-type transcriptional repressor FabR low > 73
Pectobacterium carotovorum WPP14 0.73 HER17_RS14975 5-oxoprolinase subunit PxpA 0.83 HER17_RS00965 HTH-type transcriptional repressor FabR 0.62 37
Escherichia coli BL21 0.73 ECD_00673 UPF0271 family protein 0.88 ECD_03848 transcriptional repressor of fabA and fabB low > 61
Escherichia coli ECOR38 0.73 HEPCGN_01215 pxpA 5-oxoprolinase subunit PxpA 0.88 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR low > 87
Klebsiella michiganensis M5al 0.73 BWI76_RS08360 LamB/YcsF family protein 0.85 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.30 13
Escherichia coli ECRC101 0.73 MCAODC_26215 pxpA 5-oxoprolinase subunit PxpA 0.88 MCAODC_04045 fabR HTH-type transcriptional repressor FabR low > 87
Escherichia coli ECRC100 0.73 OKFHMN_06995 pxpA 5-oxoprolinase subunit PxpA 0.88 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR low > 80
Escherichia coli ECRC99 0.73 KEDOAH_20970 pxpA 5-oxoprolinase subunit PxpA 0.88 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC102 0.73 NIAGMN_05050 pxpA 5-oxoprolinase subunit PxpA 0.88 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC98 0.73 JDDGAC_10650 pxpA 5-oxoprolinase subunit PxpA 0.88 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR low > 86
Escherichia coli BW25113 0.72 b0713 ybgL hypothetical protein (NCBI) 0.87 b3963 fabR DNA-binding transcriptional repressor (RefSeq) low > 76
Dickeya dadantii 3937 0.70 DDA3937_RS06425 5-oxoprolinase subunit PxpA 0.84 DDA3937_RS00980 HTH-type transcriptional repressor FabR low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2274 Uncharacterized proteins, homologs of lactam utilization protein B 0.86 EX28DRAFT_4426 transcriptional regulator, TetR family low > 76
Dickeya dianthicola 67-19 0.69 HGI48_RS06470 5-oxoprolinase subunit PxpA 0.84 HGI48_RS20395 HTH-type transcriptional repressor FabR low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF4618 Lactam utilization protein LamB 0.85 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 78
Dickeya dianthicola ME23 0.69 DZA65_RS06815 5-oxoprolinase subunit PxpA 0.84 DZA65_RS21440 HTH-type transcriptional repressor FabR low > 75
Pantoea sp. MT58 0.68 IAI47_13795 5-oxoprolinase subunit PxpA 0.85 IAI47_00940 HTH-type transcriptional repressor FabR low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_01347 5-oxoprolinase subunit A 0.86 MPMX20_04517 HTH-type transcriptional repressor FabR low > 85
Paraburkholderia graminis OAS925 0.60 ABIE53_000049 UPF0271 protein 0.22 ABIE53_002363 AcrR family transcriptional regulator low > 113
Shewanella loihica PV-4 0.44 Shew_0006 LamB/YcsF family protein (RefSeq) 0.59 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) low > 60
Shewanella amazonensis SB2B 0.41 Sama_0021 hypothetical protein (RefSeq) 0.59 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0497 LamB/YcsF 0.26 Psyr_4450 transcriptional regulator, TetR family low > 86
Lysobacter sp. OAE881 0.39 ABIE51_RS08130 5-oxoprolinase subunit PxpA 0.25 ABIE51_RS00935 HTH-type transcriptional repressor FabR low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0497 LamB/YcsF 0.26 Psyr_4450 transcriptional regulator, TetR family low > 86
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_1994 Uncharacterized proteins, homologs of lactam utilization protein B 0.55 B158DRAFT_1831 transcriptional regulator, TetR family low > 40

Not shown: 22 genomes with orthologs for EX31_RS23395 only; 19 genomes with orthologs for EX31_RS14160 only