Conservation of cofitness between EX31_RS02805 and EX31_RS04635 in Rahnella sp. WP5

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS02805 ornithine decarboxylase SpeF 1.0 EX31_RS04635 aminodeoxychorismate synthase component II 0.61 20
Serratia liquefaciens MT49 0.79 IAI46_21480 ornithine decarboxylase SpeF 0.79 IAI46_23595 aminodeoxychorismate synthase component II low > 86
Shewanella sp. ANA-3 0.73 Shewana3_3871 ornithine decarboxylase (RefSeq) 0.66 Shewana3_0606 aminodeoxychorismate synthase, glutamine amidotransferase subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.73 SO0314 speF ornithine decarboxylase, inducible (NCBI ptt file) 0.65 SO0613 pabA para-aminobenzoate synthase glutamine amidotransferase, component II (NCBI ptt file) low > 76
Escherichia coli ECRC102 0.72 NIAGMN_16945 speC ornithine decarboxylase 0.72 NIAGMN_14990 pabA aminodeoxychorismate synthase component 2 — —
Escherichia coli ECRC100 0.72 OKFHMN_19180 speC ornithine decarboxylase 0.72 OKFHMN_17220 pabA aminodeoxychorismate synthase component 2 low > 80
Escherichia coli ECRC98 0.72 JDDGAC_22810 speC ornithine decarboxylase 0.72 JDDGAC_20850 pabA aminodeoxychorismate synthase component 2 low > 86
Escherichia coli Nissle 1917 0.72 ECOLIN_RS16490 ornithine decarboxylase 0.72 ECOLIN_RS19245 aminodeoxychorismate synthase component 2 low > 55
Dickeya dadantii 3937 0.72 DDA3937_RS04870 ornithine decarboxylase 0.79 DDA3937_RS19455 aminodeoxychorismate synthase component II — —
Escherichia coli ECRC99 0.72 KEDOAH_08960 speC ornithine decarboxylase 0.72 KEDOAH_10920 pabA aminodeoxychorismate synthase component 2 — —
Escherichia coli ECRC101 0.72 MCAODC_09700 speC ornithine decarboxylase 0.72 MCAODC_07750 pabA aminodeoxychorismate synthase component 2 low > 87
Enterobacter sp. TBS_079 0.72 MPMX20_03832 Constitutive ornithine decarboxylase 0.71 MPMX20_04263 Aminodeoxychorismate synthase component 2 low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00751 Constitutive ornithine decarboxylase 0.71 OHPLBJKB_00342 Aminodeoxychorismate synthase component 2 low > 73
Escherichia coli BL21 0.72 ECD_02795 ornithine decarboxylase, constitutive 0.71 ECD_03211 aminodeoxychorismate synthase, subunit II low > 61
Escherichia coli ECOR27 0.72 NOLOHH_11040 speC ornithine decarboxylase 0.71 NOLOHH_09020 pabA aminodeoxychorismate synthase component 2 low > 75
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_19405 ornithine decarboxylase SpeF 0.76 CSW01_13255 aminodeoxychorismate/anthranilate synthase component II low > 62
Escherichia coli ECRC62 0.72 BNILDI_09625 speC ornithine decarboxylase 0.71 BNILDI_02500 pabA aminodeoxychorismate synthase component 2 low > 75
Escherichia fergusonii Becca 0.72 EFB2_00937 Constitutive ornithine decarboxylase 0.72 EFB2_00462 Aminodeoxychorismate synthase component 2 low > 86
Escherichia coli ECOR38 0.72 HEPCGN_18450 speC ornithine decarboxylase 0.71 HEPCGN_16050 pabA aminodeoxychorismate synthase component 2 low > 87
Escherichia coli BW25113 0.72 b2965 speC ornithine decarboxylase isozyme (VIMSS) 0.71 b3360 pabA para-aminobenzoate synthase component II (NCBI) low > 76
Klebsiella michiganensis M5al 0.72 BWI76_RS24175 ornithine decarboxylase 0.72 BWI76_RS26005 glutamine amidotransferase low > 92
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3012 Arginine/lysine/ornithine decarboxylases 0.72 EX28DRAFT_4169 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase low > 76
Shewanella amazonensis SB2B 0.72 Sama_3334 ornithine decarboxylase (RefSeq) 0.63 Sama_3015 para-aminobenzoate synthase glutamine amidotransferase, component II (RefSeq) low > 62
Dickeya dianthicola 67-19 0.72 HGI48_RS04890 ornithine decarboxylase 0.79 HGI48_RS19575 aminodeoxychorismate synthase component II — —
Dickeya dianthicola ME23 0.71 DZA65_RS05225 ornithine decarboxylase 0.80 DZA65_RS20660 aminodeoxychorismate synthase component II low > 75
Pectobacterium carotovorum WPP14 0.71 HER17_RS16680 ornithine decarboxylase 0.80 HER17_RS01905 aminodeoxychorismate synthase component II low > 75
Pantoea sp. MT58 0.71 IAI47_03545 ornithine decarboxylase 0.74 IAI47_01950 aminodeoxychorismate/anthranilate synthase component II low > 76
Erwinia tracheiphila SCR3 0.71 LU632_RS05390 ornithine decarboxylase 0.70 LU632_RS22815 aminodeoxychorismate synthase component II — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF4604 Ornithine decarboxylase (EC 4.1.1.17) 0.71 GFF3709 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) low > 78
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS33025 ornithine decarboxylase 0.58 QEN71_RS27555 aminodeoxychorismate/anthranilate synthase component II low > 153
Magnetospirillum magneticum AMB-1 0.39 AMB_RS05630 amino acid decarboxylase 0.55 AMB_RS14405 type 1 glutamine amidotransferase — —
Azospirillum sp. SherDot2 0.38 MPMX19_05197 Inducible ornithine decarboxylase 0.55 MPMX19_01016 Anthranilate synthase component 2 — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS27535 amino acid decarboxylase 0.52 AZOBR_RS07460 anthranilate synthase — —

Not shown: 3 genomes with orthologs for EX31_RS02805 only; 66 genomes with orthologs for EX31_RS04635 only