Conservation of cofitness between EFB2_01128 and EFB2_00276 in Escherichia fergusonii Becca

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia fergusonii Becca 1.0 EFB2_01128 putative glucarate transporter 1.0 EFB2_00276 Cyclic di-GMP-binding protein 0.59 2
Escherichia coli BL21 1.00 ECD_02634 putative D-glucarate transporter 0.99 ECD_03380 regulator of cellulose synthase, cyclic di-GMP binding low > 61
Escherichia coli ECRC62 1.00 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 0.99 BNILDI_03415 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 75
Escherichia coli ECOR27 1.00 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 0.99 NOLOHH_08140 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 75
Escherichia coli ECOR38 1.00 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 0.99 HEPCGN_15080 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 87
Escherichia coli BW25113 1.00 b2789 gudP predicted D-glucarate transporter (NCBI) 0.99 b3532 bcsB regulator of cellulose synthase, cyclic di-GMP binding (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 1.00 ECOLIN_RS20200 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 55
Escherichia coli ECRC102 1.00 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 0.96 NIAGMN_13935 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB — —
Escherichia coli ECRC99 1.00 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 0.96 KEDOAH_11975 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB — —
Escherichia coli ECRC98 1.00 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 0.97 JDDGAC_19805 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 86
Escherichia coli ECRC100 1.00 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 0.96 OKFHMN_16175 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 80
Escherichia coli ECRC101 1.00 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 0.96 MCAODC_06690 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 87
Klebsiella michiganensis M5al 0.98 BWI76_RS22835 MFS transporter 0.76 BWI76_RS26780 cellulose synthase regulator BcsB low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4843 D-glucarate permease 0.83 GFF491 Cyclic di-GMP binding protein precursor low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2870 D-galactonate transporter 0.79 EX28DRAFT_4045 Bacterial cellulose synthase subunit low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03659 putative glucarate transporter 0.79 MPMX20_04417 Cyclic di-GMP-binding protein low > 85
Rahnella sp. WP5 0.87 EX31_RS03160 MFS transporter 0.57 EX31_RS06705 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 89
Pectobacterium carotovorum WPP14 0.84 HER17_RS04075 MFS transporter 0.59 HER17_RS00360 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS17055 MFS transporter 0.15 DDA3937_RS00535 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS17110 MFS transporter 0.15 HGI48_RS20855 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS18185 MFS transporter 0.15 DZA65_RS21870 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 75
Pseudomonas putida KT2440 0.69 PP_3600 glucarate transporter 0.44 PP_2636 cellulose synthase and translocator subunit low > 96
Pseudomonas fluorescens SBW25 0.69 PFLU_RS04245 MFS transporter 0.23 PFLU_RS01480 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS04245 MFS transporter 0.23 PFLU_RS01480 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 109
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_5043 D-galactarate permease 0.25 PfGW456L13_3883 Cyclic di-GMP binding protein precursor low > 87
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1108 D-galactarate permease 0.24 Pf1N1B4_5157 Cyclic di-GMP binding protein precursor low > 87
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS29085 glucarate transporter 0.28 RR42_RS37335 cellulose synthase BcsB subunit low > 128
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS31870 MFS transporter 0.27 QEN71_RS08570 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 153
Paraburkholderia graminis OAS925 0.64 ABIE53_006507 ACS family glucarate transporter-like MFS transporter 0.25 ABIE53_001176 hypothetical protein low > 113
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS24150 glucarate transporter 0.27 BPHYT_RS28940 divalent ion tolerance protein CutA low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_05318 MFS transporter, ACS family, glucarate transporter 0.28 H281DRAFT_01385 cellulose synthase subunit low > 103
Variovorax sp. SCN45 0.53 GFF7272 D-glucarate permease 0.27 GFF1315 Cyclic di-GMP-binding protein BcsB low > 127

Not shown: 18 genomes with orthologs for EFB2_01128 only; 4 genomes with orthologs for EFB2_00276 only