Conservation of cofitness between ECD_03800 and ECD_04121 in Escherichia coli BL21

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03800 ferrous iron and zinc transporter 1.0 ECD_04121 protein inhibitor of RNase E 0.47 3
Escherichia coli ECRC62 1.00 BNILDI_05555 fieF CDF family cation-efflux transporter FieF 1.00 BNILDI_07430 rraB ribonuclease E inhibitor RraB low > 75
Escherichia coli ECRC99 1.00 KEDOAH_14320 fieF CDF family cation-efflux transporter FieF 1.00 KEDOAH_16325 rraB ribonuclease E inhibitor RraB — —
Escherichia coli ECRC100 1.00 OKFHMN_13835 fieF CDF family cation-efflux transporter FieF 1.00 OKFHMN_11830 rraB ribonuclease E inhibitor RraB low > 80
Escherichia coli ECRC98 1.00 JDDGAC_17460 fieF CDF family cation-efflux transporter FieF 1.00 JDDGAC_15470 rraB ribonuclease E inhibitor RraB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04136 Ferrous-iron efflux pump FieF 1.00 OHPLBJKB_03781 Regulator of ribonuclease activity B low > 73
Escherichia coli BW25113 1.00 b3915 fieF ferrous iron efflux protein F (NCBI) 1.00 b4255 yjgD hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_05970 fieF CDF family cation-efflux transporter FieF 1.00 NOLOHH_04085 rraB ribonuclease E inhibitor RraB low > 75
Escherichia coli ECRC101 1.00 MCAODC_04335 fieF CDF family cation-efflux transporter FieF 1.00 MCAODC_02335 rraB ribonuclease E inhibitor RraB low > 87
Escherichia coli ECRC102 1.00 NIAGMN_11590 fieF CDF family cation-efflux transporter FieF 1.00 NIAGMN_09680 rraB ribonuclease E inhibitor RraB — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS22550 CDF family cation-efflux transporter FieF 1.00 ECOLIN_RS24670 ribonuclease E inhibitor RraB low > 55
Escherichia coli ECOR38 1.00 HEPCGN_12480 fieF CDF family cation-efflux transporter FieF 1.00 HEPCGN_10020 rraB ribonuclease E inhibitor RraB low > 87
Escherichia fergusonii Becca 1.00 EFB2_04703 Ferrous-iron efflux pump FieF 1.00 EFB2_04280 Regulator of ribonuclease activity B low > 86
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4389 cation diffusion facilitator family transporter 0.69 EX28DRAFT_3462 Uncharacterized protein conserved in bacteria low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF2282 Cobalt-zinc-cadmium resistance protein 0.75 GFF941 Ribonuclease E inhibitor RraB low > 78
Enterobacter sp. TBS_079 0.90 MPMX20_04553 Ferrous-iron efflux pump FieF 0.69 MPMX20_00557 Regulator of ribonuclease activity B low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS00730 cation-efflux pump FieF 0.72 BWI76_RS03015 RNase E inhibitor protein low > 92
Serratia liquefaciens MT49 0.81 IAI46_24650 CDF family cation-efflux transporter FieF 0.65 IAI46_02325 ribonuclease E inhibitor RraB low > 86
Pantoea sp. MT58 0.81 IAI47_00775 CDF family cation-efflux transporter FieF 0.58 IAI47_16825 ribonuclease E inhibitor RraB low > 76
Dickeya dadantii 3937 0.74 DDA3937_RS00840 CDF family cation-efflux transporter FieF 0.59 DDA3937_RS01945 ribonuclease E inhibitor RraB low > 74
Pectobacterium carotovorum WPP14 0.73 HER17_RS00720 CDF family cation-efflux transporter FieF 0.61 HER17_RS19495 ribonuclease E inhibitor RraB low > 75
Erwinia tracheiphila SCR3 0.72 LU632_RS21845 fieF CDF family cation-efflux transporter FieF 0.74 LU632_RS20905 rraB ribonuclease E inhibitor RraB low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS20535 CDF family cation-efflux transporter FieF 0.60 HGI48_RS01920 ribonuclease E inhibitor RraB low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS21580 CDF family cation-efflux transporter FieF 0.60 DZA65_RS01990 ribonuclease E inhibitor RraB low > 75
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_13580 cation-efflux pump FieF 0.53 CSW01_02230 ribonuclease E inhibitor RraB low > 62
Shewanella amazonensis SB2B 0.43 Sama_3430 cation efflux family protein (RefSeq) 0.51 Sama_3138 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.42 Shewana3_0255 cation diffusion facilitator family transporter (RefSeq) 0.48 Shewana3_0569 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.42 SO4475 cation efflux family protein (NCBI ptt file) 0.48 SO0568 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.41 Shew_3568 cation diffusion facilitator family transporter (RefSeq) 0.49 Shew_0451 hypothetical protein (RefSeq) 0.62 20
Rahnella sp. WP5 0.33 EX31_RS10790 cation diffusion facilitator family transporter 0.62 EX31_RS12830 ribonuclease E inhibitor RraB low > 89

Not shown: 48 genomes with orthologs for ECD_03800 only; 1 genomes with orthologs for ECD_04121 only