Conservation of cofitness between ECD_02982 and ECD_03885 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02982 propionate kinase/acetate kinase C, anaerobic 1.0 ECD_03885 homoserine O-transsuccinylase low > 61
Escherichia coli BW25113 1.00 b3115 tdcD propionate kinase/acetate kinase C, anaerobic (RefSeq) 1.00 b4013 metA homoserine O-succinyltransferase (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_17245 tdcD propionate kinase 0.99 HEPCGN_11915 metA homoserine O-succinyltransferase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00585 Propionate kinase 0.99 OHPLBJKB_04037 Homoserine O-succinyltransferase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_10190 tdcD propionate kinase 0.99 NOLOHH_05420 metA homoserine O-succinyltransferase low > 75
Escherichia coli ECRC62 1.00 BNILDI_01335 tdcD propionate kinase 0.99 BNILDI_06100 metA homoserine O-succinyltransferase low > 75
Escherichia coli ECRC98 0.99 JDDGAC_22045 tdcD propionate kinase 0.99 JDDGAC_16900 metA homoserine O-succinyltransferase low > 86
Escherichia coli ECRC99 0.99 KEDOAH_09735 tdcD propionate kinase 0.99 KEDOAH_14885 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC102 0.99 NIAGMN_16175 tdcD propionate kinase 0.99 NIAGMN_11025 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC101 0.99 MCAODC_08925 tdcD propionate kinase 0.99 MCAODC_03775 metA homoserine O-succinyltransferase low > 87
Escherichia coli ECRC100 0.99 OKFHMN_18410 tdcD propionate kinase 0.99 OKFHMN_13275 metA homoserine O-succinyltransferase low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17930 propionate kinase 1.00 ECOLIN_RS25515 homoserine O-succinyltransferase — —
Escherichia fergusonii Becca 0.99 EFB2_00699 Propionate kinase 1.00 EFB2_04597 Homoserine O-succinyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3208 Acetate kinase (EC 2.7.2.1) 0.96 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) low > 78
Enterobacter sp. TBS_079 0.80 MPMX20_04019 Propionate kinase 0.93 MPMX20_00230 Homoserine O-succinyltransferase 0.29 63
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3176 acetate kinase 0.94 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) low > 76
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS08510 acetate kinase 0.50 HMPREF1058_RS14680 homoserine O-succinyltransferase — —
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS04945 acetate kinase 0.48 HMPREF1078_RS10000 homoserine O-succinyltransferase — —
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS02735 acetate kinase 0.49 ABI39_RS10360 homoserine O-succinyltransferase — —
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS03200 acetate kinase 0.49 HMPREF1181_RS00105 homoserine O-succinyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT3693 acetate kinase (NCBI ptt file) 0.50 BT2413 homoserine O-succinyltransferase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.39 BACOVA_03500 acetate kinase 0.51 BACOVA_03007 homoserine O-succinyltransferase — —
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_2079 ackA acetate kinase 0.44 Synpcc7942_0371 metA homoserine O-succinyltransferase low > 38
Azospirillum brasilense Sp245 0.31 AZOBR_RS12495 acetate kinase 0.39 AZOBR_RS14010 homoserine O-succinyltransferase low > 97
Dinoroseobacter shibae DFL-12 0.29 Dshi_0632 acetate kinase (RefSeq) 0.40 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS13535 acetate/propionate family kinase 0.36 QEN71_RS42530 homoserine O-succinyltransferase low > 153
Sinorhizobium meliloti 1021 0.28 SM_b21184 acetate kinase 0.43 SMc03797 homoserine O-succinyltransferase low > 103
Phaeobacter inhibens DSM 17395 0.27 PGA1_c28840 acetate kinase AckA 0.42 PGA1_c14560 homoserine O-succinyltransferase MetA low > 62

Not shown: 20 genomes with orthologs for ECD_02982 only; 18 genomes with orthologs for ECD_03885 only