Conservation of cofitness between ECD_02953 and ECD_03028 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent 1.0 ECD_03028 tryptophan transporter of high affinity low > 61
Escherichia coli ECOR38 1.00 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 HEPCGN_17035 mtr tryptophan permease low > 87
Escherichia coli BW25113 1.00 b3084 ygjO putative enzyme (VIMSS) 1.00 b3161 mtr tryptophan transporter of high affinity (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 NOLOHH_09960 mtr tryptophan permease low > 75
Escherichia coli ECRC62 0.99 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 BNILDI_01575 mtr tryptophan permease low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 ECOLIN_RS18155 tryptophan permease — —
Escherichia coli ECRC102 0.99 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 NIAGMN_15920 mtr tryptophan permease — —
Escherichia coli ECRC98 0.99 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 JDDGAC_21785 mtr tryptophan permease low > 86
Escherichia coli ECRC99 0.99 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 KEDOAH_09990 mtr tryptophan permease — —
Escherichia coli ECRC100 0.99 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 OKFHMN_18160 mtr tryptophan permease low > 80
Escherichia coli ECRC101 0.99 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 MCAODC_08680 mtr tryptophan permease low > 87
Escherichia fergusonii Becca 0.99 EFB2_00728 Ribosomal RNA large subunit methyltransferase G 1.00 EFB2_00662 Tryptophan-specific transport protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G 1.00 OHPLBJKB_00539 Tryptophan-specific transport protein low > 73
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3153 16S RNA G1207 methylase RsmC 0.91 EX28DRAFT_3210 aromatic amino acid transport protein low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G 0.90 MPMX20_04065 Tryptophan-specific transport protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.93 GFF1505 Tryptophan-specific transport protein low > 78
Klebsiella michiganensis M5al 0.71 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.90 BWI76_RS25050 tryptophan permease low > 92
Serratia liquefaciens MT49 0.67 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.57 IAI46_17270 tryptophan permease low > 86
Pectobacterium carotovorum WPP14 0.63 HER17_RS18680 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.74 HER17_RS17275 tryptophan permease low > 75
Pantoea sp. MT58 0.62 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.39 IAI47_21075 tryptophan permease low > 76
Rahnella sp. WP5 0.58 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.74 EX31_RS01105 tryptophan permease low > 89
Shewanella amazonensis SB2B 0.36 Sama_2548 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.51 Sama_3479 aromatic amino acid transport protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.36 SO1097 conserved hypothetical protein (NCBI ptt file) 0.56 SO4601 mtr tryptophan-specific transport protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_11685 ribosomal RNA large subunit methyltransferase G 0.36 CSW01_14800 transposase low > 62
Shewanella sp. ANA-3 0.35 Shewana3_0932 methyltransferase small (RefSeq) 0.56 Shewana3_3987 aromatic amino acid transporter (RefSeq) low > 73
Shewanella loihica PV-4 0.34 Shew_2886 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.54 Shew_3531 aromatic amino acid transporter (RefSeq) low > 60

Not shown: 20 genomes with orthologs for ECD_02953 only; 1 genomes with orthologs for ECD_03028 only