Conservation of cofitness between ECD_00332 and ECD_03025 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00332 diguanylate cyclase, cellulose regualtor 1.0 ECD_03025 U32 peptidase family protein 0.36 15
Escherichia coli BW25113 1.00 b0385 yaiC predicted diguanylate cyclase (NCBI) 1.00 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02340 diguanylate cyclase AdrA 1.00 ECOLIN_RS18140 peptidase U32 family protein low > 55
Escherichia coli ECOR38 1.00 HEPCGN_07255 adrA diguanylate cyclase AdrA 1.00 HEPCGN_17050 protease low > 87
Escherichia coli ECRC100 1.00 OKFHMN_08615 adrA diguanylate cyclase AdrA 1.00 OKFHMN_18175 protease low > 80
Escherichia coli ECRC99 1.00 KEDOAH_19350 adrA diguanylate cyclase AdrA 1.00 KEDOAH_09975 protease — —
Escherichia coli ECRC102 1.00 NIAGMN_06670 adrA diguanylate cyclase AdrA 1.00 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU — —
Escherichia coli ECRC101 1.00 MCAODC_27840 adrA diguanylate cyclase AdrA 1.00 MCAODC_08695 protease low > 87
Escherichia coli ECRC98 1.00 JDDGAC_12270 adrA diguanylate cyclase AdrA 1.00 JDDGAC_21800 protease low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03289 putative diguanylate cyclase DgcC 1.00 OHPLBJKB_00542 putative protease YhbU low > 73
Escherichia coli ECOR27 1.00 NOLOHH_01540 adrA diguanylate cyclase AdrA 1.00 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia coli ECRC62 0.99 BNILDI_22955 adrA diguanylate cyclase AdrA 1.00 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia fergusonii Becca 0.99 EFB2_03671 putative diguanylate cyclase DgcC 0.99 EFB2_00665 putative protease YhbU low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF4282 Protein YaiC 0.97 GFF1510 FIG139552: Putative protease low > 78
Enterobacter asburiae PDN3 0.62 EX28DRAFT_2586 diguanylate cyclase (GGDEF) domain 0.94 EX28DRAFT_3207 Collagenase and related proteases low > 76
Enterobacter sp. TBS_079 0.61 MPMX20_00975 putative diguanylate cyclase DgcC 0.94 MPMX20_04062 putative protease YhbU low > 85
Pectobacterium carotovorum WPP14 0.46 HER17_RS14460 diguanylate cyclase AdrA 0.91 HER17_RS18160 U32 family peptidase low > 75
Serratia liquefaciens MT49 0.42 IAI46_05890 diguanylate cyclase 0.87 IAI46_02015 U32 family peptidase low > 86
Dickeya dadantii 3937 0.41 DDA3937_RS06830 diguanylate cyclase 0.89 DDA3937_RS03115 U32 family peptidase low > 74
Pseudomonas stutzeri RCH2 0.34 Psest_1455 diguanylate cyclase (GGDEF) domain 0.67 Psest_0835 Collagenase and related proteases low > 67
Pseudomonas simiae WCS417 0.34 PS417_21835 histidine kinase 0.64 PS417_15755 protease low > 88
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_21315 histidine kinase 0.66 AO353_22050 protease low > 101
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_01080 histidine kinase 0.66 AO356_25160 protease low > 104
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS21525 hypothetical protein 0.52 RR42_RS08775 protease low > 128
Acidovorax sp. GW101-3H11 0.25 Ac3H11_3069 Response regulator containing a CheY-like receiver domain and a GGDEF domain 0.58 Ac3H11_4294 FIG139552: Putative protease low > 79
Pantoea sp. MT58 0.24 IAI47_19665 diguanylate cyclase 0.83 IAI47_16965 U32 family peptidase low > 76
Klebsiella michiganensis M5al 0.22 BWI76_RS21800 MASE2 domain/diguanylate cyclase 0.98 BWI76_RS24970 peptidase U32 low > 92
Rahnella sp. WP5 0.20 EX31_RS22990 diguanylate cyclase 0.91 EX31_RS08480 U32 family peptidase low > 89

Not shown: 9 genomes with orthologs for ECD_00332 only; 25 genomes with orthologs for ECD_03025 only