Conservation of cofitness between ECD_03886 and ECD_02888 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03886 malate synthase A 1.0 ECD_02888 Radical SAM superfamily protein 0.61 10
Escherichia coli BW25113 1.00 b4014 aceB malate synthase (NCBI) 1.00 b4469 ygiQ hypothetical protein (NCBI) low > 76
Escherichia coli ECRC101 0.99 MCAODC_03770 aceB malate synthase A 0.99 MCAODC_09430 ygiQ YgiQ family radical SAM protein low > 87
Escherichia coli ECRC100 0.99 OKFHMN_13270 aceB malate synthase A 0.99 OKFHMN_18915 ygiQ YgiQ family radical SAM protein low > 80
Escherichia coli ECRC99 0.99 KEDOAH_14890 aceB malate synthase A 0.99 KEDOAH_09230 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC102 0.99 NIAGMN_11020 aceB malate synthase A 0.99 NIAGMN_16680 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC98 0.99 JDDGAC_16895 aceB malate synthase A 0.99 JDDGAC_22550 ygiQ YgiQ family radical SAM protein low > 86
Escherichia coli ECRC62 0.99 BNILDI_06105 aceB malate synthase A 1.00 BNILDI_00820 ygiQ YgiQ family radical SAM protein low > 75
Escherichia coli ECOR27 0.99 NOLOHH_05415 aceB malate synthase A 1.00 NOLOHH_10695 ygiQ YgiQ family radical SAM protein low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04036 Malate synthase A 1.00 OHPLBJKB_00686 hypothetical protein low > 73
Escherichia coli ECOR38 0.99 HEPCGN_11910 aceB malate synthase A 1.00 HEPCGN_17785 ygiQ YgiQ family radical SAM protein low > 87
Escherichia fergusonii Becca 0.99 EFB2_04596 Malate synthase A 1.00 EFB2_00795 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS25510 malate synthase A 0.99 ECOLIN_RS17355 YgiQ family radical SAM protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1351 Malate synthase (EC 2.3.3.9) 0.93 GFF3129 Probable Fe-S oxidoreductase family 2 low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS01660 malate synthase A 0.93 BWI76_RS24310 YgiQ family radical SAM protein low > 92
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4330 malate synthase A 0.92 EX28DRAFT_3051 uncharacterized radical SAM protein YgiQ low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_00231 Malate synthase A 0.92 MPMX20_03857 hypothetical protein low > 85
Serratia liquefaciens MT49 0.84 IAI46_23195 malate synthase A 0.82 IAI46_21835 YgiQ family radical SAM protein low > 86
Rahnella sp. WP5 0.82 EX31_RS11740 malate synthase A 0.80 EX31_RS04200 YgiQ family radical SAM protein low > 89
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03825 malate synthase A 0.64 CSW01_08605 YgiQ family radical SAM protein low > 62
Shewanella sp. ANA-3 0.68 Shewana3_2943 malate synthase (RefSeq) 0.68 Shewana3_3874 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_2381 malate synthase (RefSeq) 0.70 Sama_3349 hypothetical protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.67 SO1483 aceB Malate synthase (EC 2.3.3.9) (from data) 0.69 SO0311 hypothetical Fe-S oxidoreductase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_1275 malate synthase (RefSeq) 0.70 Shew_0233 hypothetical protein (RefSeq) low > 60
Azospirillum sp. SherDot2 0.50 MPMX19_02139 Malate synthase A 0.57 MPMX19_06038 hypothetical protein low > 112
Dechlorosoma suillum PS 0.44 Dsui_0019 malate synthase A 0.60 Dsui_2420 uncharacterized radical SAM protein YgiQ low > 51

Not shown: 27 genomes with orthologs for ECD_03886 only; 28 genomes with orthologs for ECD_02888 only