Conservation of cofitness between ECD_02844 and ECD_02838 in Escherichia coli BL21

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02844 malate synthase G 1.0 ECD_02838 putative type II secretion protein GspD low > 61
Escherichia coli BW25113 1.00 b2976 glcB malate synthase (NCBI) 0.38 b3325 yheF putative general protein secretion protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00731 Malate synthase G 1.00 OHPLBJKB_00739 Type II secretion system protein D low > 73
Escherichia coli ECOR27 1.00 NOLOHH_10940 glcB malate synthase G 1.00 NOLOHH_10975 gspD general secretion pathway protein D low > 75
Escherichia coli ECOR38 0.99 HEPCGN_18015 glcB malate synthase G 1.00 HEPCGN_18050 gspD general secretion pathway protein D low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17120 malate synthase G 1.00 ECOLIN_RS17085 type II secretion system secretin GspD low > 55
Escherichia fergusonii Becca 0.99 EFB2_00839 Malate synthase G 0.99 EFB2_00845 Secretin GspD 2 low > 86
Pseudomonas stutzeri RCH2 0.68 Psest_3837 malate synthase G 0.23 Psest_2577 general secretion pathway protein D low > 67
Variovorax sp. OAS795 0.64 ABID97_RS04710 malate synthase G 0.18 ABID97_RS06950 type II secretion system secretin GspD low > 91
Acidovorax sp. GW101-3H11 0.64 Ac3H11_4835 Malate synthase G (EC 2.3.3.9) 0.15 Ac3H11_2030 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD)
Variovorax sp. SCN45 0.64 GFF6305 Malate synthase G (EC 2.3.3.9) 0.18 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF3040 Malate synthase G (EC 2.3.3.9) 0.20 GFF1390 General secretion pathway protein D low > 90
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4700 malate synthase 0.08 Psyr_3141 type II and III secretion system protein:NolW-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4700 malate synthase 0.08 Psyr_3141 type II and III secretion system protein:NolW-like protein low > 86
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_1139 Malate synthase G (EC 2.3.3.9) 0.20 PfGW456L13_266 General secretion pathway protein D low > 87
Pseudomonas sp. S08-1 0.60 OH686_10405 malate synthase G 0.26 OH686_11840 type II secretion system protein D low > 80
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_07560 malate synthase G 0.19 AO353_12545 type II secretion system protein GspD low > 101
Pseudomonas sp. RS175 0.59 PFR28_04110 Malate synthase G 0.15 PFR28_01750 Secretin XcpQ low > 88
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_14100 malate synthase G 0.20 AO356_09345 type II secretion system protein GspD low > 104
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_4752 Malate synthase G (EC 2.3.3.9) 0.21 Pf6N2E2_651 General secretion pathway protein D low > 103
Marinobacter adhaerens HP15 0.59 HP15_2188 malate synthase G 0.23 HP15_2355 type II and III secretion system protein low > 73
Pseudomonas fluorescens SBW25 0.59 PFLU_RS27685 malate synthase G 0.20 PFLU_RS11890 type II secretion system secretin GspD low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS27685 malate synthase G 0.20 PFLU_RS11890 type II secretion system secretin GspD low > 109
Pseudomonas simiae WCS417 0.58 PS417_26040 malate synthase 0.19 PS417_11295 general secretion pathway protein GspD low > 88
Acinetobacter radioresistens SK82 0.56 MPMX26_01247 Malate synthase G 0.25 MPMX26_00196 Secretin XcpQ low > 36
Alteromonas macleodii MIT1002 0.55 MIT1002_02833 Malate synthase G 0.49 MIT1002_03976 Pullulanase secretion envelope PulD low > 70
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2979 malate synthase (EC 2.3.3.9) 0.15 Ga0059261_3945 type II secretion system protein D low > 68

Not shown: 19 genomes with orthologs for ECD_02844 only; 30 genomes with orthologs for ECD_02838 only