Conservation of cofitness between ECD_02518 and ECD_02540 in Escherichia coli BL21

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 1.0 ECD_02540 multidrug efflux system 0.63 4
Escherichia coli ECRC99 0.99 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 KEDOAH_07355 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Escherichia coli ECRC102 0.99 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 NIAGMN_18550 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Escherichia coli ECRC101 0.99 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 MCAODC_11305 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 87
Escherichia coli ECRC100 0.99 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 OKFHMN_20780 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 80
Escherichia coli ECRC98 0.99 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 JDDGAC_24445 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 86
Escherichia coli BW25113 0.99 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) 1.00 b2685 emrA multidrug efflux system (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase 1.00 ECOLIN_RS14965 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 1.00 OHPLBJKB_01048 Multidrug export protein EmrA low > 73
Escherichia fergusonii Becca 0.99 EFB2_01268 4-aminobutyrate aminotransferase GabT 1.00 EFB2_01243 Multidrug export protein EmrA low > 86
Escherichia coli ECOR27 0.99 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 NOLOHH_12620 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 75
Escherichia coli ECRC62 0.99 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 BNILDI_11180 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 75
Escherichia coli ECOR38 0.98 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 HEPCGN_19975 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.89 GFF1592 Multidrug resistance protein A low > 78
Pseudomonas sp. S08-1 0.77 OH686_11880 4-aminobutyrate transaminase 0.18 OH686_04565 Membrane fusion component of MSF-type tripartite multidrug efflux system low > 80
Pseudomonas sp. RS175 0.74 PFR28_04756 5-aminovalerate aminotransferase DavT 0.41 PFR28_02748 Multidrug export protein EmrA low > 88
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.41 Pf6N2E2_148 Membrane fusion component of tripartite multidrug resistance system low > 103
Pseudomonas fluorescens SBW25 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.41 PFLU_RS18900 HlyD family efflux transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.41 PFLU_RS18900 HlyD family efflux transporter periplasmic adaptor subunit low > 109
Pseudomonas putida KT2440 0.73 PP_0214 4-aminobutyrate aminotransferase 0.40 PP_3549 multidrug efflux transport system - membrane fusion protein low > 96
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_10715 4-aminobutyrate aminotransferase 0.38 AO356_01030 hemolysin D low > 104
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.40 AO353_27845 hemolysin D low > 101
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.39 PfGW456L13_2605 Membrane fusion component of tripartite multidrug resistance system low > 87
Pseudomonas simiae WCS417 0.73 PS417_00900 4-aminobutyrate aminotransferase 0.40 PS417_16915 hemolysin D low > 88
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.41 Pf1N1B4_4001 Membrane fusion component of tripartite multidrug resistance system low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.42 Psyr_1730 Secretion protein HlyD low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.42 Psyr_1730 Secretion protein HlyD low > 86
Variovorax sp. OAS795 0.64 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.40 ABID97_RS20395 efflux RND transporter periplasmic adaptor subunit low > 91
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.40 Ac3H11_2351 Membrane fusion component of tripartite multidrug resistance system low > 79
Rhodopseudomonas palustris CGA009 0.50 TX73_012015 4-aminobutyrate--2-oxoglutarate transaminase 0.34 TX73_019155 efflux RND transporter periplasmic adaptor subunit low > 86
Lysobacter sp. OAE881 0.25 ABIE51_RS02780 aspartate aminotransferase family protein 0.39 ABIE51_RS07710 efflux RND transporter periplasmic adaptor subunit low > 62

Not shown: 6 genomes with orthologs for ECD_02518 only; 37 genomes with orthologs for ECD_02540 only