Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BL21 | 1.0 | ECD_00898 | | dimethyl sulfoxide reductase, anaerobic, subunit A | 1.0 | ECD_01931 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.78 | 13 |
Escherichia coli BW25113 | 1.00 | b0894 | dmsA | anaerobic dimethyl sulfoxide reductase subunit A (VIMSS) | 0.99 | b2029 | gnd | 6-phosphogluconate dehydrogenase (NCBI) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02774 | | Dimethyl sulfoxide reductase DmsA | 0.96 | OHPLBJKB_01659 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 73 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_22190 | dmsA | dimethylsulfoxide reductase subunit A | 0.99 | KEDOAH_03680 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
Escherichia coli ECRC101 | 1.00 | OKFHMN_05545 | dmsA | dimethylsulfoxide reductase subunit A | 0.99 | OKFHMN_24470 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
Escherichia coli ECRC98 | 1.00 | JDDGAC_09355 | dmsA | dimethylsulfoxide reductase subunit A | 0.99 | JDDGAC_28580 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_24935 | dmsA | dimethylsulfoxide reductase subunit A | 0.99 | MCAODC_20470 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_03265 | dmsA | dimethylsulfoxide reductase subunit A | 0.99 | NIAGMN_22415 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
Escherichia coli ECOR27 | 1.00 | NOLOHH_22115 | dmsA | dimethylsulfoxide reductase subunit A | 0.99 | NOLOHH_15785 | gndA | NADP-dependent phosphogluconate dehydrogenase | low | > 57 |
Escherichia coli ECRC62 | 1.00 | BNILDI_20370 | dmsA | dimethylsulfoxide reductase subunit A | 0.99 | BNILDI_14695 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
Escherichia coli ECOR38 | 1.00 | HEPCGN_22965 | dmsA | dimethylsulfoxide reductase subunit A | 0.99 | HEPCGN_03175 | gndA | NADP-dependent phosphogluconate dehydrogenase | low | > 85 |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS04755 | | dimethylsulfoxide reductase subunit A | 0.99 | ECOLIN_RS11990 | | NADP-dependent phosphogluconate dehydrogenase | low | > 52 |
Escherichia fergusonii Becca | 0.99 | EFB2_03167 | | Dimethyl sulfoxide reductase DmsA | 0.99 | EFB2_01826 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 86 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF4898 | | Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) | 0.97 | GFF3903 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | low | > 78 |
Enterobacter asburiae PDN3 | 0.89 | EX28DRAFT_2038 | | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family | 0.95 | EX28DRAFT_0529 | | 6-phosphogluconate dehydrogenase (decarboxylating) | low | > 76 |
Enterobacter sp. TBS_079 | 0.89 | MPMX20_01556 | | Dimethyl sulfoxide reductase DmsA | 0.95 | MPMX20_03014 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 85 |
Klebsiella michiganensis M5al | 0.89 | BWI76_RS09680 | | dimethyl sulfoxide reductase subunit A | 0.95 | BWI76_RS19025 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | low | > 92 |
Rahnella sp. WP5 | 0.82 | EX31_RS18500 | | dimethylsulfoxide reductase subunit A | 0.88 | EX31_RS11475 | | NADP-dependent phosphogluconate dehydrogenase | — | — |
Shewanella oneidensis MR-1 | 0.38 | SO1429 | dmaA-1 | anaerobic dimethyl sulfoxide reductase, A subunit (NCBI ptt file) | 0.43 | SO1902 | gnd | 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) | low | > 76 |
Dickeya dianthicola 67-19 | 0.20 | HGI48_RS03810 | | molybdopterin-dependent oxidoreductase | 0.87 | HGI48_RS06840 | | NADP-dependent phosphogluconate dehydrogenase | low | > 71 |
Burkholderia phytofirmans PsJN | 0.13 | BPHYT_RS17300 | | molybdopterin oxidoreductase | 0.73 | BPHYT_RS29625 | | 6-phosphogluconate dehydrogenase | low | > 109 |
Paraburkholderia graminis OAS925 | 0.13 | ABIE53_003626 | | anaerobic selenocysteine-containing dehydrogenase | 0.75 | ABIE53_005122 | | 6-phosphogluconate dehydrogenase | low | > 113 |
Paraburkholderia sabiae LMG 24235 | 0.13 | QEN71_RS27460 | | molybdopterin oxidoreductase family protein | 0.76 | QEN71_RS20525 | | NADP-dependent phosphogluconate dehydrogenase | low | > 153 |
Paraburkholderia bryophila 376MFSha3.1 | 0.12 | H281DRAFT_06225 | | Anaerobic selenocysteine-containing dehydrogenase | 0.75 | H281DRAFT_03046 | | 6-phosphogluconate dehydrogenase (decarboxylating) | low | > 103 |
Azospirillum brasilense Sp245 | 0.12 | AZOBR_RS09575 | | dehydrogenase | 0.44 | AZOBR_RS15725 | | 6-phosphogluconate dehydrogenase | low | > 97 |
Agrobacterium fabrum C58 | 0.11 | Atu1136 | | reductase | 0.46 | Atu1526 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 89 |
Sinorhizobium meliloti 1021 | 0.11 | SMc00609 | | anaerobic dimethyl sulfoxide reductase subunit A | 0.47 | SMc04262 | | 6-phosphogluconate dehydrogenase | low | > 103 |
Not shown: 10 genomes with orthologs for ECD_00898 only; 27 genomes with orthologs for ECD_01931 only