Conservation of cofitness between ECD_00898 and ECD_01931 in Escherichia coli BL21

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00898 dimethyl sulfoxide reductase, anaerobic, subunit A 1.0 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating 0.78 13
Escherichia coli BW25113 1.00 b0894 dmsA anaerobic dimethyl sulfoxide reductase subunit A (VIMSS) 0.99 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02774 Dimethyl sulfoxide reductase DmsA 0.96 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating low > 73
Escherichia coli ECRC99 1.00 KEDOAH_22190 dmsA dimethylsulfoxide reductase subunit A 0.99 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC101 1.00 OKFHMN_05545 dmsA dimethylsulfoxide reductase subunit A 0.99 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC98 1.00 JDDGAC_09355 dmsA dimethylsulfoxide reductase subunit A 0.99 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC101 1.00 MCAODC_24935 dmsA dimethylsulfoxide reductase subunit A 0.99 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC102 1.00 NIAGMN_03265 dmsA dimethylsulfoxide reductase subunit A 0.99 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECOR27 1.00 NOLOHH_22115 dmsA dimethylsulfoxide reductase subunit A 0.99 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase low > 57
Escherichia coli ECRC62 1.00 BNILDI_20370 dmsA dimethylsulfoxide reductase subunit A 0.99 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECOR38 1.00 HEPCGN_22965 dmsA dimethylsulfoxide reductase subunit A 0.99 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04755 dimethylsulfoxide reductase subunit A 0.99 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase low > 52
Escherichia fergusonii Becca 0.99 EFB2_03167 Dimethyl sulfoxide reductase DmsA 0.99 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4898 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) 0.97 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2038 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 0.95 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_01556 Dimethyl sulfoxide reductase DmsA 0.95 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS09680 dimethyl sulfoxide reductase subunit A 0.95 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) low > 92
Rahnella sp. WP5 0.82 EX31_RS18500 dimethylsulfoxide reductase subunit A 0.88 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase
Shewanella oneidensis MR-1 0.38 SO1429 dmaA-1 anaerobic dimethyl sulfoxide reductase, A subunit (NCBI ptt file) 0.43 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.20 HGI48_RS03810 molybdopterin-dependent oxidoreductase 0.87 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase low > 71
Burkholderia phytofirmans PsJN 0.13 BPHYT_RS17300 molybdopterin oxidoreductase 0.73 BPHYT_RS29625 6-phosphogluconate dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.13 ABIE53_003626 anaerobic selenocysteine-containing dehydrogenase 0.75 ABIE53_005122 6-phosphogluconate dehydrogenase low > 113
Paraburkholderia sabiae LMG 24235 0.13 QEN71_RS27460 molybdopterin oxidoreductase family protein 0.76 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.12 H281DRAFT_06225 Anaerobic selenocysteine-containing dehydrogenase 0.75 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) low > 103
Azospirillum brasilense Sp245 0.12 AZOBR_RS09575 dehydrogenase 0.44 AZOBR_RS15725 6-phosphogluconate dehydrogenase low > 97
Agrobacterium fabrum C58 0.11 Atu1136 reductase 0.46 Atu1526 6-phosphogluconate dehydrogenase, decarboxylating low > 89
Sinorhizobium meliloti 1021 0.11 SMc00609 anaerobic dimethyl sulfoxide reductase subunit A 0.47 SMc04262 6-phosphogluconate dehydrogenase low > 103

Not shown: 10 genomes with orthologs for ECD_00898 only; 27 genomes with orthologs for ECD_01931 only