Conservation of cofitness between ECD_00371 and ECD_01826 in Escherichia coli BL21

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00371 tRNA s(4)U8 sulfurtransferase 1.0 ECD_01826 myristoyl-acyl carrier protein (ACP)-dependent acyltransferase 0.77 12
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03253 tRNA sulfurtransferase 1.00 OHPLBJKB_01873 Lipid A biosynthesis myristoyltransferase — —
Escherichia coli ECOR27 1.00 NOLOHH_01355 thiI tRNA sulfurtransferase 1.00 NOLOHH_16755 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC62 1.00 BNILDI_22770 thiI tRNA sulfurtransferase 1.00 BNILDI_15545 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI 0.99 ECOLIN_RS10335 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli BW25113 1.00 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) 1.00 b1855 lpxM lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_07035 thiI tRNA sulfurtransferase 0.99 HEPCGN_04720 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 85
Escherichia coli ECRC101 0.99 MCAODC_27630 thiI tRNA sulfurtransferase 1.00 MCAODC_19090 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC99 0.99 KEDOAH_19560 thiI tRNA sulfurtransferase 0.99 KEDOAH_01790 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC98 0.99 JDDGAC_12060 thiI tRNA sulfurtransferase 1.00 JDDGAC_00890 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC101 0.99 OKFHMN_08405 thiI tRNA sulfurtransferase 1.00 OKFHMN_26315 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC102 0.99 NIAGMN_06460 thiI tRNA sulfurtransferase 1.00 NIAGMN_01745 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia fergusonii Becca 0.99 EFB2_03634 tRNA sulfurtransferase 1.00 EFB2_02087 Lipid A biosynthesis myristoyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.92 GFF1634 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI 0.85 BWI76_RS18120 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Enterobacter sp. TBS_079 0.91 MPMX20_01014 tRNA sulfurtransferase 0.88 MPMX20_02760 Lipid A biosynthesis myristoyltransferase — —
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain 0.88 EX28DRAFT_0701 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase — —
Pectobacterium carotovorum WPP14 0.88 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI 0.70 HER17_RS11795 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 75
Dickeya dadantii 3937 0.88 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI 0.72 DDA3937_RS10110 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Dickeya dianthicola 67-19 0.88 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI 0.71 HGI48_RS10140 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 71
Dickeya dianthicola ME23 0.87 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI 0.71 DZA65_RS10555 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 75
Serratia liquefaciens MT49 0.85 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI 0.74 IAI46_14595 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Erwinia tracheiphila SCR3 0.85 LU632_RS18845 thiI tRNA 4-thiouridine(8) synthase ThiI 0.73 LU632_RS13385 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Rahnella sp. WP5 0.81 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI 0.75 EX31_RS10665 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 89
Pantoea sp. MT58 0.80 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI 0.78 IAI47_08475 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Shewanella sp. ANA-3 0.65 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) 0.27 Shewana3_1866 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.65 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) 0.26 SO2088 lipid A biosynthesis acyltransferase, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.64 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) 0.30 Sama_1950 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI 0.37 CSW01_01125 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 62
Shewanella loihica PV-4 0.64 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) 0.28 Shew_2213 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) low > 60

Not shown: 15 genomes with orthologs for ECD_00371 only; 1 genomes with orthologs for ECD_01826 only