Conservation of cofitness between ECD_03797 and ECD_01802 in Escherichia coli BL21

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03797 sensory histidine kinase in two-component regulatory system with CpxR 1.0 ECD_01802 RNA chaperone, putative ProP translation regulator low > 61
Escherichia coli ECOR38 1.00 HEPCGN_12495 cpxA envelope stress sensor histidine kinase CpxA 1.00 HEPCGN_04860 proQ RNA chaperone ProQ low > 87
Escherichia coli ECRC98 1.00 JDDGAC_17475 cpxA envelope stress sensor histidine kinase CpxA 1.00 JDDGAC_01035 proQ RNA chaperone ProQ 0.87 13
Escherichia coli ECRC100 1.00 OKFHMN_13850 cpxA envelope stress sensor histidine kinase CpxA 1.00 OKFHMN_26460 proQ RNA chaperone ProQ low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS22535 envelope stress sensor histidine kinase CpxA 1.00 ECOLIN_RS10195 RNA chaperone ProQ low > 55
Escherichia coli BW25113 1.00 b3911 cpxA two-component sensor protein (NCBI) 1.00 b1831 proQ putative solute/DNA competence effector (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04139 Sensor histidine kinase CpxA 1.00 OHPLBJKB_01900 RNA chaperone ProQ 0.69 1
Escherichia coli ECRC99 1.00 KEDOAH_14305 cpxA envelope stress sensor histidine kinase CpxA 1.00 KEDOAH_01645 proQ RNA chaperone ProQ — —
Escherichia coli ECRC102 1.00 NIAGMN_11605 cpxA envelope stress sensor histidine kinase CpxA 1.00 NIAGMN_01600 proQ RNA chaperone ProQ — —
Escherichia coli ECRC101 1.00 MCAODC_04350 cpxA envelope stress sensor histidine kinase CpxA 1.00 MCAODC_18945 proQ RNA chaperone ProQ low > 87
Escherichia fergusonii Becca 1.00 EFB2_04706 Sensor histidine kinase CpxA 1.00 EFB2_02170 RNA chaperone ProQ low > 86
Escherichia coli ECOR27 1.00 NOLOHH_05985 cpxA envelope stress sensor histidine kinase CpxA 1.00 NOLOHH_16970 proQ RNA chaperone ProQ low > 75
Escherichia coli ECRC62 1.00 BNILDI_05540 cpxA envelope stress sensor histidine kinase CpxA 1.00 BNILDI_15765 proQ RNA chaperone ProQ low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF2279 Copper sensory histidine kinase CpxA 0.84 GFF2846 ProQ: influences osmotic activation of compatible solute ProP low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_04557 Sensor histidine kinase CpxA 0.84 MPMX20_02738 RNA chaperone ProQ low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4386 Signal transduction histidine kinase 0.84 EX28DRAFT_0725 Activator of osmoprotectant transporter ProP low > 76
Klebsiella michiganensis M5al 0.87 BWI76_RS00715 two-component sensor histidine kinase 0.77 BWI76_RS17980 RNA chaperone ProQ 0.39 43
Rahnella sp. WP5 0.81 EX31_RS14325 envelope stress sensor histidine kinase CpxA 0.66 EX31_RS24875 RNA chaperone ProQ 0.54 48
Serratia liquefaciens MT49 0.81 IAI46_24665 envelope stress sensor histidine kinase CpxA 0.70 IAI46_10795 RNA chaperone ProQ 0.45 52
Pantoea sp. MT58 0.80 IAI47_00755 envelope stress sensor histidine kinase CpxA 0.68 IAI47_08700 RNA chaperone ProQ 0.42 14
Erwinia tracheiphila SCR3 0.78 LU632_RS21860 cpxA envelope stress sensor histidine kinase CpxA 0.66 LU632_RS13255 proQ RNA chaperone ProQ low > 74
Dickeya dadantii 3937 0.76 DDA3937_RS00775 envelope stress sensor histidine kinase CpxA 0.67 DDA3937_RS11970 RNA chaperone ProQ low > 74
Dickeya dianthicola ME23 0.75 DZA65_RS21615 envelope stress sensor histidine kinase CpxA 0.66 DZA65_RS12510 RNA chaperone ProQ — —
Dickeya dianthicola 67-19 0.75 HGI48_RS20600 envelope stress sensor histidine kinase CpxA 0.66 HGI48_RS12060 RNA chaperone ProQ low > 71
Pectobacterium carotovorum WPP14 0.75 HER17_RS00660 envelope stress sensor histidine kinase CpxA 0.61 HER17_RS11695 RNA chaperone ProQ low > 75
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13595 two-component system sensor histidine kinase CpxA 0.48 CSW01_07520 RNA chaperone ProQ low > 62
Shewanella amazonensis SB2B 0.28 Sama_3433 sensor protein CpxA (RefSeq) 0.38 Sama_1584 putative solute/DNA competence effector (RefSeq) — —
Shewanella sp. ANA-3 0.26 Shewana3_0252 ATPase domain-containing protein (RefSeq) 0.33 Shewana3_1777 putative solute/DNA competence effector (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_3571 integral membrane sensor signal transduction histidine kinase (RefSeq) 0.36 Shew_1801 putative solute/DNA competence effector (RefSeq) low > 60
Shewanella oneidensis MR-1 0.25 SO4478 cpxA sensor protein CpxA (NCBI ptt file) 0.36 SO2602 hypothetical Activator of ProP osmoprotectant transporter (NCBI ptt file) low > 76

Not shown: 3 genomes with orthologs for ECD_03797 only; 1 genomes with orthologs for ECD_01802 only