Conservation of cofitness between ECD_00111 and ECD_01619 in Escherichia coli BL21

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00111 aromatic amino acid transporter 1.0 ECD_01619 transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated 0.72 4
Escherichia coli BW25113 1.00 b0112 aroP aromatic amino acid transporter (NCBI) 1.00 b1649 ydhM predicted DNA-binding transcriptional regulator (RefSeq)
Escherichia coli ECOR38 1.00 HEPCGN_08495 aroP aromatic amino acid transporter AroP 0.98 HEPCGN_05825 nemR DNA-binding transcriptional regulator NemR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03549 Aromatic amino acid transport protein AroP 1.00 OHPLBJKB_02076 HTH-type transcriptional repressor NemR low > 73
Escherichia coli ECOR27 1.00 NOLOHH_02860 aroP aromatic amino acid transporter AroP 1.00 NOLOHH_17960 nemR DNA-binding transcriptional regulator NemR low > 75
Escherichia coli ECRC62 1.00 BNILDI_08750 aroP aromatic amino acid transporter AroP 1.00 BNILDI_16750 nemR DNA-binding transcriptional regulator NemR low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00600 aromatic amino acid transporter AroP 1.00 ECOLIN_RS09195 DNA-binding transcriptional regulator NemR low > 55
Escherichia fergusonii Becca 0.99 EFB2_03937 Aromatic amino acid transport protein AroP 1.00 EFB2_02343 HTH-type transcriptional repressor NemR low > 86
Escherichia coli ECRC102 0.99 NIAGMN_08365 aroP aromatic amino acid transporter AroP 0.97 NIAGMN_00625 nemR DNA-binding transcriptional regulator NemR
Escherichia coli ECRC98 0.99 JDDGAC_14110 aroP aromatic amino acid transporter AroP 0.97 JDDGAC_02030 nemR DNA-binding transcriptional regulator NemR low > 86
Escherichia coli ECRC100 0.99 OKFHMN_10515 aroP aromatic amino acid transporter AroP 0.97 OKFHMN_27440 nemR DNA-binding transcriptional regulator NemR low > 80
Escherichia coli ECRC99 0.99 KEDOAH_17640 aroP aromatic amino acid transporter AroP 0.97 KEDOAH_00670 nemR DNA-binding transcriptional regulator NemR
Escherichia coli ECRC101 0.99 MCAODC_01030 aroP aromatic amino acid transporter AroP 0.98 MCAODC_17970 nemR DNA-binding transcriptional regulator NemR low > 87
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3707 Gamma-aminobutyrate permease and related permeases 0.84 EX28DRAFT_1647 transcriptional regulator, TetR family low > 76
Klebsiella michiganensis M5al 0.95 BWI76_RS04870 aromatic amino acid transporter AroP 0.74 BWI76_RS16470 transcriptional repressor NemR low > 92
Enterobacter sp. TBS_079 0.94 MPMX20_00805 Aromatic amino acid transport protein AroP 0.83 MPMX20_01987 HTH-type transcriptional repressor NemR low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF124 Aromatic amino acid transport protein AroP 0.83 GFF3625 Transcriptional regulator, TetR family low > 78
Rahnella sp. WP5 0.87 EX31_RS03490 aromatic amino acid transporter AroP 0.36 EX31_RS01435 TetR/AcrR family transcriptional regulator low > 89
Pantoea sp. MT58 0.85 IAI47_15820 aromatic amino acid transporter AroP 0.48 IAI47_10760 TetR/AcrR family transcriptional regulator low > 76
Serratia liquefaciens MT49 0.78 IAI46_21335 amino acid permease 0.47 IAI46_11285 TetR/AcrR family transcriptional regulator low > 86
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS03190 amino acid permease 0.21 QEN71_RS20880 TetR/AcrR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS15500 aromatic amino acid transporter 0.14 BPHYT_RS20385 TetR family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.70 PP_0927 aromatic amino acid transport protein 0.41 PP_2475 Transcriptional regulator, TetR family 0.17 38
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS23870 amino acid permease 0.36 PFLU_RS11765 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS23870 amino acid permease 0.36 PFLU_RS11765 TetR/AcrR family transcriptional regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_04042 phenylacetate transporter (from data) 0.36 H281DRAFT_01790 transcriptional regulator, TetR family low > 103
Pseudomonas simiae WCS417 0.67 PS417_22235 aromatic amino acid transporter 0.36 PS417_11180 TetR family transcriptional regulator low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3580 aromatic amino acid:proton symporter, AAT family 0.34 Psyr_2933 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3580 aromatic amino acid:proton symporter, AAT family 0.34 Psyr_2933 transcriptional regulator, TetR family low > 86
Pseudomonas sp. S08-1 0.66 OH686_21130 Aromatic amino acid transport protein AroP 0.24 OH686_06240 Transcriptional regulator, AcrR family low > 80
Pseudomonas stutzeri RCH2 0.66 Psest_1697 Gamma-aminobutyrate permease and related permeases 0.21 Psest_0932 Transcriptional regulator low > 67
Acinetobacter radioresistens SK82 0.64 MPMX26_01474 Aromatic amino acid transport protein AroP 0.36 MPMX26_00888 HTH-type transcriptional repressor NemR

Not shown: 14 genomes with orthologs for ECD_00111 only; 20 genomes with orthologs for ECD_01619 only