Conservation of cofitness between ECD_00974 and ECD_01604 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00974 Modulator of FtsH protease, inner membrane protein 1.0 ECD_01604 dipeptide and tripeptide permease A 0.81 4
Escherichia coli BW25113 1.00 b0970 yccA inner membrane protein (NCBI) 1.00 b1634 tppB putative tripeptide transporter permease (NCBI) 0.28 69
Escherichia coli Nissle 1917 1.00 ECOLIN_RS05100 FtsH protease modulator YccA 1.00 ECOLIN_RS09120 dipeptide/tripeptide permease DtpA low > 55
Escherichia coli ECOR27 1.00 NOLOHH_21725 yccA FtsH protease modulator YccA 1.00 NOLOHH_18035 dtpA dipeptide/tripeptide permease DtpA low > 75
Escherichia fergusonii Becca 1.00 EFB2_03101 Modulator of FtsH protease YccA 1.00 EFB2_02358 Dipeptide and tripeptide permease A low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02696 Modulator of FtsH protease YccA 1.00 OHPLBJKB_02091 Dipeptide and tripeptide permease A low > 73
Escherichia coli ECRC62 1.00 BNILDI_19890 yccA FtsH protease modulator YccA 1.00 BNILDI_16825 dtpA dipeptide/tripeptide permease DtpA low > 75
Escherichia coli ECOR38 1.00 HEPCGN_23350 yccA FtsH protease modulator YccA 1.00 HEPCGN_05900 dtpA dipeptide/tripeptide permease DtpA low > 87
Escherichia coli ECRC99 0.99 KEDOAH_22565 yccA FtsH protease modulator YccA 1.00 KEDOAH_00590 dtpA dipeptide/tripeptide permease DtpA
Escherichia coli ECRC101 0.99 MCAODC_24560 yccA FtsH protease modulator YccA 0.99 MCAODC_17895 dtpA dipeptide/tripeptide permease DtpA low > 87
Escherichia coli ECRC102 0.99 NIAGMN_02890 yccA FtsH protease modulator YccA 1.00 NIAGMN_00550 dtpA dipeptide/tripeptide permease DtpA
Escherichia coli ECRC100 0.99 OKFHMN_05170 yccA FtsH protease modulator YccA 1.00 OKFHMN_27515 dtpA dipeptide/tripeptide permease DtpA low > 80
Escherichia coli ECRC98 0.99 JDDGAC_08780 yccA FtsH protease modulator YccA 1.00 JDDGAC_02105 dtpA dipeptide/tripeptide permease DtpA low > 86
Enterobacter sp. TBS_079 0.96 MPMX20_01622 Modulator of FtsH protease YccA 0.88 MPMX20_02004 Dipeptide and tripeptide permease A low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS10070 BAX inhibitor protein 0.92 BWI76_RS16390 dipeptide/tripeptide permease A low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_1964 Integral membrane protein, interacts with FtsH 0.87 EX28DRAFT_1630 amino acid/peptide transporter (Peptide:H+ symporter), bacterial low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF3263 Putative TEGT family carrier/transport protein 0.93 GFF3640 Di/tripeptide permease DtpA low > 78
Pectobacterium carotovorum WPP14 0.79 HER17_RS08480 FtsH protease modulator YccA 0.78 HER17_RS10865 dipeptide/tripeptide permease DtpA low > 75
Pantoea sp. MT58 0.76 IAI47_12580 FtsH protease modulator YccA 0.79 IAI47_10500 dipeptide/tripeptide permease DtpA low > 76
Serratia liquefaciens MT49 0.72 IAI46_08945 FtsH protease modulator YccA 0.76 IAI46_11450 dipeptide/tripeptide permease DtpA low > 86
Rahnella sp. WP5 0.69 EX31_RS17975 FtsH protease modulator YccA 0.77 EX31_RS15730 dipeptide/tripeptide permease DtpA low > 89
Alteromonas macleodii MIT1002 0.42 MIT1002_02167 Modulator of FtsH protease YccA 0.18 MIT1002_00972 Di-/tripeptide transporter low > 70
Shewanella loihica PV-4 0.38 Shew_2014 hypothetical protein (RefSeq) 0.21 Shew_1397 amino acid/peptide transporter (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_06835 BAX inhibitor protein 0.56 CSW01_05045 dipeptide/tripeptide permease DtpA low > 62
Shewanella oneidensis MR-1 0.36 SO2375 membrane protein, putative (NCBI ptt file) 0.34 SO1277 proton-dependent oligopeptide transporter (POT) family protein (NCBI ptt file) low > 76
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS05955 Bax inhibitor-1/YccA family protein 0.36 QEN71_RS18370 oligopeptide:H+ symporter low > 153
Paraburkholderia graminis OAS925 0.30 ABIE53_002746 modulator of FtsH protease 0.35 ABIE53_004167 POT family proton-dependent oligopeptide transporter low > 113
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_00512 hypothetical protein 0.33 H281DRAFT_03131 proton-dependent oligopeptide transporter, POT family low > 103

Not shown: 35 genomes with orthologs for ECD_00974 only; 11 genomes with orthologs for ECD_01604 only