| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_1694 | | AAA ATPase | 1.0 | Dsui_2922 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | 0.67 | 2 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_05630 | | replication-associated recombination protein A | 0.17 | CSW01_09860 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | low | > 62 |
| Shewanella oneidensis MR-1 | 0.51 | SO2308 | | ATPase, AAA family (NCBI ptt file) | 0.20 | SO4573 | menD | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.51 | Shewana3_2052 | | recombination factor protein RarA (RefSeq) | 0.19 | Shewana3_3965 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase (RefSeq) | low | > 73 |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS09670 | | recombination factor protein RarA | 0.16 | BWI76_RS20075 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 92 |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS09605 | | replication-associated recombination protein A | 0.16 | DDA3937_RS05915 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 74 |
| Shewanella amazonensis SB2B | 0.51 | Sama_1774 | | recombination factor protein RarA (RefSeq) | 0.18 | Sama_3460 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase (RefSeq) | low | > 62 |
| Dickeya dianthicola ME23 | 0.51 | DZA65_RS09930 | | replication-associated recombination protein A | 0.16 | DZA65_RS06295 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.51 | HGI48_RS09620 | | replication-associated recombination protein A | 0.17 | HGI48_RS05960 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 71 |
| Shewanella loihica PV-4 | 0.50 | Shew_2022 | | recombination factor protein RarA (RefSeq) | 0.20 | Shew_3599 | | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase (RefSeq) | low | > 60 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_08570 | | replication-associated recombination protein A | 0.14 | IAI46_17560 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 86 |
| Rahnella sp. WP5 | 0.50 | EX31_RS18515 | | replication-associated recombination protein A | 0.17 | EX31_RS19355 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 89 |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_22950 | rarA | replication-associated recombination protein RarA | 0.17 | HEPCGN_22150 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase | low | > 87 |
| Escherichia coli ECRC101 | 0.50 | MCAODC_24950 | rarA | replication-associated recombination protein RarA | 0.17 | MCAODC_13975 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase | low | > 87 |
| Escherichia coli BW25113 | 0.50 | b0892 | ycaJ | recombination protein (NCBI) | 0.17 | b2264 | menD | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_03280 | rarA | replication-associated recombination protein RarA | 0.17 | NIAGMN_20705 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase | — | — |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS04745 | | replication-associated recombination protein RarA | 0.16 | ECOLIN_RS13185 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 55 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_09370 | rarA | replication-associated recombination protein RarA | 0.17 | JDDGAC_26900 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase | low | > 86 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_22130 | rarA | replication-associated recombination protein RarA | 0.16 | NOLOHH_14560 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase | low | > 75 |
| Escherichia fergusonii Becca | 0.50 | EFB2_03169 | | Replication-associated recombination protein A | 0.16 | EFB2_01591 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | low | > 86 |
| Escherichia coli ECRC100 | 0.50 | OKFHMN_05560 | rarA | replication-associated recombination protein RarA | 0.17 | OKFHMN_22935 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase | low | > 80 |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_22175 | rarA | replication-associated recombination protein RarA | 0.17 | KEDOAH_05260 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF4896 | | FIG065221: Holliday junction DNA helicase | 0.16 | GFF1870 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) | low | > 78 |
| Escherichia coli BL21 | 0.50 | ECD_00896 | | recombination intermediate processing DNA-dependent ATPase | 0.17 | ECD_02191 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_02776 | | Replication-associated recombination protein A | 0.17 | OHPLBJKB_01446 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | low | > 73 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_20385 | rarA | replication-associated recombination protein RarA | 0.16 | BNILDI_13475 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.50 | MPMX20_01554 | | Replication-associated recombination protein A | 0.17 | MPMX20_03200 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_2040 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.17 | EX28DRAFT_0340 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.49 | LU632_RS09755 | | replication-associated recombination protein A | 0.15 | LU632_RS08105 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS12345 | | replication-associated recombination protein A | 0.17 | HER17_RS15555 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 75 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.43 | CA264_02215 | | AAA family ATPase | 0.16 | CA264_08835 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | — | — |
| Bacteroides stercoris CC31F | 0.40 | HMPREF1181_RS16975 | | replication-associated recombination protein A | 0.14 | HMPREF1181_RS15695 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | low | > 56 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.39 | Echvi_4603 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.17 | Echvi_2344 | | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase | — | — |