Conservation of cofitness between DZA65_RS01875 and DZA65_RS13340 in Dickeya dianthicola ME23

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS01875 anaerobic ribonucleoside-triphosphate reductase-activating protein 1.0 DZA65_RS13340 phosphoenolpyruvate synthase 0.28 20
Dickeya dianthicola 67-19 1.00 HGI48_RS01820 anaerobic ribonucleoside-triphosphate reductase-activating protein 1.00 HGI48_RS12875 phosphoenolpyruvate synthase low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS01870 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.97 DDA3937_RS12805 phosphoenolpyruvate synthase 0.61 26
Pectobacterium carotovorum WPP14 0.80 HER17_RS19530 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.92 HER17_RS08885 phosphoenolpyruvate synthase low > 75
Enterobacter asburiae PDN3 0.79 EX28DRAFT_3436 anaerobic ribonucleoside-triphosphate reductase activating protein 0.86 EX28DRAFT_1704 phosphoenolpyruvate synthase (EC 2.7.9.2) low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_00530 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.85 MPMX20_01922 Phosphoenolpyruvate synthase low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS02930 anaerobic ribonucleoside-triphosphate reductase activating protein 0.85 BWI76_RS17065 phosphoenolpyruvate synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF918 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) 0.86 GFF3539 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 78
Escherichia coli ECRC62 0.78 BNILDI_07335 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 BNILDI_16455 ppsA phosphoenolpyruvate synthase low > 75
Serratia liquefaciens MT49 0.78 IAI46_02130 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.87 IAI46_11115 phosphoenolpyruvate synthase low > 86
Escherichia fergusonii Becca 0.78 EFB2_04296 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 EFB2_02289 Phosphoenolpyruvate synthase low > 86
Escherichia coli Nissle 1917 0.78 ECOLIN_RS24580 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 ECOLIN_RS09510 phosphoenolpyruvate synthase — —
Escherichia coli ECRC99 0.77 KEDOAH_16240 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 KEDOAH_00965 ppsA phosphoenolpyruvate synthase — —
Escherichia coli ECOR27 0.77 NOLOHH_04175 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 NOLOHH_17665 ppsA phosphoenolpyruvate synthase low > 75
Escherichia coli ECOR38 0.77 HEPCGN_10110 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 HEPCGN_05510 ppsA phosphoenolpyruvate synthase low > 87
Escherichia coli ECRC98 0.77 JDDGAC_15555 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 JDDGAC_01720 ppsA phosphoenolpyruvate synthase low > 86
Escherichia coli BW25113 0.77 b4237 nrdG anaerobic ribonucleotide reductase activating protein (NCBI) 0.86 b1702 pps phosphoenolpyruvate synthase (NCBI) low > 76
Escherichia coli ECRC102 0.77 NIAGMN_09765 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 NIAGMN_00920 ppsA phosphoenolpyruvate synthase — —
Escherichia coli ECRC100 0.77 OKFHMN_11915 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 OKFHMN_27145 ppsA phosphoenolpyruvate synthase low > 80
Escherichia coli ECRC101 0.77 MCAODC_02420 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.86 MCAODC_18265 ppsA phosphoenolpyruvate synthase low > 87
Escherichia coli BL21 0.77 ECD_04105 anaerobic ribonucleotide reductase activating protein 0.86 ECD_01671 phosphoenolpyruvate synthase low > 61
Rahnella sp. WP5 0.76 EX31_RS08400 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.87 EX31_RS13935 phosphoenolpyruvate synthase low > 89
Erwinia tracheiphila SCR3 0.75 LU632_RS20980 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.84 LU632_RS11025 ppsA phosphoenolpyruvate synthase low > 74
Pantoea sp. MT58 0.74 IAI47_16930 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.85 IAI47_10905 phosphoenolpyruvate synthase low > 76
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_16805 anaerobic ribonucleoside-triphosphate reductase activating protein 0.71 CSW01_19050 phosphoenolpyruvate synthase low > 62
Shewanella loihica PV-4 0.66 Shew_2448 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) 0.73 Shew_1549 phosphoenolpyruvate synthase (RefSeq) — —
Shewanella sp. ANA-3 0.65 Shewana3_2602 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) 0.74 Shewana3_1736 phosphoenolpyruvate synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.65 SO2833 nrdG anaerobic ribonucleoside-triphosphate reductase activating protein (NCBI ptt file) 0.74 SO2644 ppsA phosphoenolpyruvate synthase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.58 Sama_1276 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) 0.75 Sama_2072 phosphoenolpyruvate synthase (RefSeq) low > 62

Not shown: 6 genomes with orthologs for DZA65_RS01875 only; 44 genomes with orthologs for DZA65_RS13340 only