Conservation of cofitness between CSW01_06320 and CSW01_19195 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06320 competence/damage-inducible protein A 1.0 CSW01_19195 LysR family transcriptional regulator 0.50 4
Rahnella sp. WP5 0.37 EX31_RS19320 nicotinamide mononucleotide deamidase-related protein YfaY 0.26 EX31_RS14970 HTH-type transcriptional regulator HdfR low > 89
Pectobacterium carotovorum WPP14 0.37 HER17_RS15515 nicotinamide mononucleotide deamidase-related protein YfaY 0.26 HER17_RS01040 HTH-type transcriptional regulator HdfR low > 75
Serratia liquefaciens MT49 0.37 IAI46_17520 nicotinamide mononucleotide deamidase-related protein YfaY 0.28 IAI46_24385 HTH-type transcriptional regulator HdfR low > 87
Pantoea sp. MT58 0.36 IAI47_06440 nicotinamide mononucleotide deamidase-related protein YfaY 0.26 IAI47_01000 HTH-type transcriptional regulator HdfR low > 76
Klebsiella michiganensis M5al 0.36 BWI76_RS20000 competence/damage-inducible protein A 0.26 BWI76_RS00940 transcriptional regulator HdfR low > 92
Erwinia tracheiphila SCR3 0.36 LU632_RS08130 nicotinamide mononucleotide deamidase-related protein YfaY 0.25 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR low > 73
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13516_RS06650 nicotinamide mononucleotide deamidase-related protein YfaY 0.26 PagCFBP13516_RS00995 hdfR HTH-type transcriptional regulator HdfR low > 80
Dickeya dianthicola ME23 0.36 DZA65_RS06325 nicotinamide mononucleotide deamidase-related protein YfaY 0.28 DZA65_RS21375 HTH-type transcriptional regulator HdfR low > 75
Enterobacter sp. TBS_079 0.35 MPMX20_03189 Nicotinamide-nucleotide amidohydrolase PncC 0.25 MPMX20_04505 HTH-type transcriptional regulator HdfR low > 85
Dickeya dianthicola 67-19 0.35 HGI48_RS05995 nicotinamide mononucleotide deamidase-related protein YfaY 0.28 HGI48_RS20335 HTH-type transcriptional regulator HdfR low > 71
Escherichia fergusonii Becca 0.35 EFB2_01607 Nicotinamide-nucleotide amidohydrolase PncC 0.26 EFB2_04871 HTH-type transcriptional regulator HdfR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1854 Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type E 0.25 GFF2907 HTH-type transcriptional regulator hdfR low > 78
Escherichia coli BL21 0.35 ECD_02175 inactive PncC family protein 0.26 ECD_03642 flhDC operon transcriptional repressor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01462 Nicotinamide-nucleotide amidohydrolase PncC 0.26 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR low > 74
Escherichia coli ECOR38 0.35 HEPCGN_22230 yfaY nicotinamide mononucleotide deamidase-related protein YfaY 0.26 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR low > 88
Escherichia coli Nissle 1917 0.35 ECOLIN_RS13105 nicotinamide mononucleotide deamidase-related protein YfaY 0.26 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR low > 55
Escherichia coli ECRC62 0.35 BNILDI_13555 yfaY nicotinamide mononucleotide deamidase-related protein YfaY 0.26 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR low > 75
Dickeya dadantii 3937 0.35 DDA3937_RS05945 nicotinamide mononucleotide deamidase-related protein YfaY 0.29 DDA3937_RS20190 HTH-type transcriptional regulator HdfR low > 74
Escherichia coli BW25113 0.35 b2249 yfaY competence damage-inducible protein A (NCBI) 0.26 b4480 hdfR transcriptional regulator HdfR (NCBI) low > 76
Escherichia coli ECRC100 0.35 OKFHMN_23015 yfaY nicotinamide mononucleotide deamidase-related protein YfaY 0.26 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR low > 79
Escherichia coli ECRC101 0.35 MCAODC_14055 yfaY nicotinamide mononucleotide deamidase-related protein YfaY 0.26 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR low > 87
Escherichia coli ECRC102 0.35 NIAGMN_20785 yfaY nicotinamide mononucleotide deamidase-related protein YfaY 0.26 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR low > 80
Escherichia coli ECRC99 0.35 KEDOAH_05180 yfaY nicotinamide mononucleotide deamidase-related protein YfaY 0.26 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR — —
Escherichia coli ECOR27 0.35 NOLOHH_14640 yfaY nicotinamide mononucleotide deamidase-related protein YfaY 0.26 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli ECRC98 0.35 JDDGAC_26980 yfaY nicotinamide mononucleotide deamidase-related protein YfaY 0.26 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR low > 87
Erwinia amylovora T8 0.32 OLJFJH_11520 nicotinamide mononucleotide deamidase-related protein YfaY 0.26 OLJFJH_06200 HTH-type transcriptional regulator HdfR low > 58
Shewanella amazonensis SB2B 0.31 Sama_0252 competence/damage-inducible protein CinA (RefSeq) 0.36 Sama_1997 LysR family transcriptional regulator (RefSeq) 0.40 30
Shewanella sp. ANA-3 0.31 Shewana3_3908 competence/damage-inducible protein CinA (RefSeq) 0.37 Shewana3_2403 LysR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.31 SO0272 cinA competence/damage-inducible protein CinA (NCBI ptt file) 0.38 SO2202 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.30 Shew_0198 competence/damage-inducible protein CinA (RefSeq) 0.67 Shew_2897 LysR family transcriptional regulator (RefSeq) low > 60

Not shown: 4 genomes with orthologs for CSW01_06320 only; 0 genomes with orthologs for CSW01_19195 only