Conservation of cofitness between CSW01_10125 and CSW01_18795 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10125 maf-like protein 1.0 CSW01_18795 cold-shock protein CspV 0.47 4
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF3369 FIG146278: Maf/YceF/YhdE family protein 0.70 GFF454 Cold shock protein CspA low > 78
Pectobacterium carotovorum WPP14 0.56 HER17_RS08620 Maf-like protein 0.70 HER17_RS11745 RNA chaperone/antiterminator CspA — —
Pantoea sp. MT58 0.55 IAI47_12100 septum formation inhibitor Maf 0.69 IAI47_14075 transcription antiterminator/RNA stability regulator CspE low > 76
Escherichia coli ECOR27 0.55 NOLOHH_21140 yceF 7-methyl-GTP pyrophosphatase 0.70 NOLOHH_07950 cspA Major cold shock protein low > 76
Escherichia coli ECOR38 0.55 HEPCGN_23870 yceF 7-methyl-GTP pyrophosphatase 0.70 HEPCGN_14895 cspA Major cold shock protein low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_02579 Maf-like protein YceF 0.70 OHPLBJKB_00150 Cold shock protein CspA low > 74
Escherichia coli ECRC62 0.55 BNILDI_19300 yceF 7-methyl-GTP pyrophosphatase 0.70 BNILDI_03595 cspA Major cold shock protein low > 75
Escherichia fergusonii Becca 0.55 EFB2_02888 7-methyl-GTP pyrophosphatase 0.70 EFB2_00251 Cold shock protein CspA low > 86
Escherichia coli BL21 0.54 ECD_01083 m(7)GTP pyrophosphatase 0.70 ECD_03406 RNA chaperone and antiterminator, cold-inducible — —
Escherichia coli BW25113 0.54 b1087 yceF orf, hypothetical protein (VIMSS) 0.70 b3556 cspA major cold shock protein (NCBI) — —
Escherichia coli ECRC101 0.54 MCAODC_22970 yceF 7-methyl-GTP pyrophosphatase 0.70 MCAODC_06520 cspA Major cold shock protein low > 87
Escherichia coli ECRC100 0.54 OKFHMN_03610 yceF 7-methyl-GTP pyrophosphatase 0.70 OKFHMN_16005 cspA Major cold shock protein — —
Escherichia coli ECRC98 0.54 JDDGAC_07270 yceF 7-methyl-GTP pyrophosphatase 0.70 JDDGAC_19635 cspA Major cold shock protein low > 87
Escherichia coli ECRC102 0.54 NIAGMN_24220 yceF 7-methyl-GTP pyrophosphatase 0.70 NIAGMN_13765 cspA Major cold shock protein low > 80
Escherichia coli ECRC99 0.54 KEDOAH_24145 yceF 7-methyl-GTP pyrophosphatase 0.70 KEDOAH_12145 cspA Major cold shock protein — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS06285 7-methyl-GTP pyrophosphatase 0.70 ECOLIN_RS20345 RNA chaperone/antiterminator CspA low > 55
Enterobacter sp. TBS_079 0.54 MPMX20_01767 7-methyl-GTP pyrophosphatase 0.73 MPMX20_00176 Cold shock protein CspA low > 85
Erwinia amylovora T8 0.54 OLJFJH_15560 septum formation inhibitor Maf 0.70 OLJFJH_17275 transcription antiterminator/RNA stability regulator CspE — —
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS05235 septum formation inhibitor Maf 0.70 PagCFBP13505_RS20805 RNA chaperone/antiterminator CspA low > 74
Klebsiella pneumoniae MKP103 0.53 KDGMDA_18665 septum formation inhibitor Maf 0.70 KDGMDA_16340 transcription antiterminator/RNA stability regulator CspE low > 95
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1843 MAF protein 0.72 EX28DRAFT_3819 Cold shock proteins — —
Pseudomonas stutzeri RCH2 0.51 Psest_1683 MAF protein 0.62 Psest_3977 Cold shock proteins low > 67
Erwinia tracheiphila SCR3 0.51 LU632_RS14850 Maf-like protein 0.70 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE — —
Klebsiella michiganensis M5al 0.50 BWI76_RS11060 septum formation inhibitor Maf 0.73 BWI76_RS10395 cold-shock protein low > 92
Dickeya dianthicola 67-19 0.50 HGI48_RS13215 septum formation inhibitor Maf 0.71 HGI48_RS19865 cold-shock protein — —
Dickeya dianthicola ME23 0.50 DZA65_RS13685 septum formation inhibitor Maf 0.71 DZA65_RS20940 cold-shock protein low > 75
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_04437 7-methyl-GTP pyrophosphatase 0.68 GEMAOFIL_04142 putative cold shock protein A — —
Dickeya dadantii 3937 0.49 DDA3937_RS13150 septum formation inhibitor Maf 0.72 DDA3937_RS19755 cold-shock protein low > 74
Dechlorosoma suillum PS 0.47 Dsui_2442 MAF protein 0.67 Dsui_2659 cold shock protein low > 51
Methylophilus sp. DMC18 0.45 GFF1259 7-methyl-GTP pyrophosphatase 0.66 GFF958 Cold shock protein CspV low > 43
Rahnella sp. WP5 0.45 EX31_RS24405 septum formation inhibitor Maf 0.69 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE low > 89
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1642 Maf-like protein 0.63 Psyr_2160 cold-shock DNA-binding protein family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1642 Maf-like protein 0.63 Psyr_2160 cold-shock DNA-binding protein family — —
Alteromonas macleodii MIT1002 0.41 MIT1002_01727 Maf-like protein YceF 0.72 MIT1002_01248 Cold shock-like protein CspG low > 70
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS14130 septum formation inhibitor Maf 0.64 RR42_RS20855 cold-shock protein low > 128
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS04525 Maf-like protein 0.65 QEN71_RS39145 cold-shock protein — —

Not shown: 56 genomes with orthologs for CSW01_10125 only; 7 genomes with orthologs for CSW01_18795 only