Conservation of cofitness between CSW01_06990 and CSW01_17690 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06990 QacE family quaternary ammonium compound efflux SMR transporter 1.0 CSW01_17690 NADH-dependent alcohol dehydrogenase 0.65 1
Pseudomonas putida KT2440 0.64 PP_1701 transporter 0.46 PP_2492 alcohol dehydrogenase, NAD(P)-dependent
Pseudomonas sp. S08-1 0.61 OH686_19635 small multidrug resistance family (SMR) protein 0.38 OH686_06550 NADPH-dependent broad range aldehyde dehydrogenase YqhD low > 80
Enterobacter asburiae PDN3 0.59 EX28DRAFT_3348 Membrane transporters of cations and cationic drugs 0.44 EX28DRAFT_3049 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family low > 76
Enterobacter sp. TBS_079 0.58 MPMX20_00430 Guanidinium exporter 0.45 MPMX20_03855 Alcohol dehydrogenase YqhD low > 85
Klebsiella michiganensis M5al 0.58 BWI76_RS02430 multidrug transporter 0.45 BWI76_RS24300 NADH-dependent alcohol dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF2001 Quaternary ammonium compound-resistance protein SugE 0.45 GFF3124 NADPH-dependent broad range aldehyde dehydrogenase YqhD low > 78
Pontibacter actiniarum KMM 6156, DSM 19842 0.58 CA264_20035 QacE family quaternary ammonium compound efflux SMR transporter 0.48 CA264_07375 NADH-dependent alcohol dehydrogenase
Serratia liquefaciens MT49 0.56 IAI46_01525 quaternary ammonium compound efflux SMR transporter SugE 0.46 IAI46_21750 alcohol dehydrogenase low > 87
Klebsiella pneumoniae MKP103 0.55 KDGMDA_10925 quaternary ammonium compound efflux SMR transporter SugE 0.45 KDGMDA_05135 alcohol dehydrogenase low > 95
Escherichia coli ECRC99 0.55 KEDOAH_15790 sugE quaternary ammonium compound efflux SMR transporter SugE 0.45 KEDOAH_09200 yqhD alcohol dehydrogenase
Escherichia coli ECRC100 0.55 OKFHMN_12375 sugE quaternary ammonium compound efflux SMR transporter SugE 0.45 OKFHMN_18945 yqhD alcohol dehydrogenase low > 79
Escherichia coli ECRC62 0.55 BNILDI_06855 sugE quaternary ammonium compound efflux SMR transporter SugE 0.46 BNILDI_00795 yqhD alcohol dehydrogenase low > 75
Escherichia coli ECOR27 0.55 NOLOHH_04635 sugE quaternary ammonium compound efflux SMR transporter SugE 0.46 NOLOHH_10720 yqhD alcohol dehydrogenase low > 76
Escherichia coli Nissle 1917 0.55 ECOLIN_RS24100 quaternary ammonium compound efflux SMR transporter SugE 0.46 ECOLIN_RS17335 alcohol dehydrogenase low > 55
Escherichia coli BL21 0.55 ECD_04020 multidrug efflux system protein 0.46 ECD_02884 aldehyde reductase, NADPH-dependent low > 61
Escherichia coli ECRC98 0.55 JDDGAC_16010 sugE quaternary ammonium compound efflux SMR transporter SugE 0.45 JDDGAC_22580 yqhD alcohol dehydrogenase low > 87
Escherichia coli ECOR38 0.55 HEPCGN_10600 sugE quaternary ammonium compound efflux SMR transporter SugE 0.46 HEPCGN_17810 yqhD alcohol dehydrogenase low > 88
Escherichia fergusonii Becca 0.55 EFB2_04385 Guanidinium exporter 0.46 EFB2_00799 Alcohol dehydrogenase YqhD low > 86
Escherichia coli BW25113 0.55 b4148 sugE suppresses groEL, may be chaperone (VIMSS) 0.46 b3011 yqhD alcohol dehydrogenase, NAD(P)-dependent (NCBI) low > 76
Escherichia coli ECRC101 0.55 MCAODC_02885 sugE quaternary ammonium compound efflux SMR transporter SugE 0.45 MCAODC_09460 yqhD alcohol dehydrogenase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03892 Quaternary ammonium compound-resistance protein SugE 0.46 OHPLBJKB_00690 Alcohol dehydrogenase YqhD low > 74
Escherichia coli ECRC102 0.55 NIAGMN_10220 sugE quaternary ammonium compound efflux SMR transporter SugE 0.45 NIAGMN_16710 yqhD alcohol dehydrogenase low > 80
Shewanella sp. ANA-3 0.51 Shewana3_1676 small multidrug resistance protein (RefSeq) 0.48 Shewana3_0261 iron-containing alcohol dehydrogenase (RefSeq)
Shewanella oneidensis MR-1 0.51 SO1901 sugE sugE protein (NCBI ptt file) 0.48 SO4469 alcohol dehydrogenase, iron-containing (NCBI ptt file) low > 76
Acinetobacter baumannii LAC-4 0.47 RR41_RS15715 multidrug efflux SMR transporter 0.47 RR41_RS16250 iron-containing alcohol dehydrogenase low > 55
Pectobacterium carotovorum WPP14 0.46 HER17_RS09145 multidrug efflux SMR transporter 0.44 HER17_RS19710 alcohol dehydrogenase low > 75
Acinetobacter radioresistens SK82 0.45 MPMX26_02568 Guanidinium exporter 0.47 MPMX26_00884 Alcohol dehydrogenase YqhD
Dechlorosoma suillum PS 0.43 Dsui_1699 cation/cationic drug transporter 0.26 Dsui_2116 Fe-dependent oxidoreductase, alcohol dehydrogenase low > 51
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_3053 Membrane transporters of cations and cationic drugs 0.41 Echvi_1168 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family low > 79
Bacteroides stercoris CC31F 0.38 HMPREF1181_RS10150 multidrug efflux SMR transporter 0.28 HMPREF1181_RS04790 iron-containing alcohol dehydrogenase low > 56
Alteromonas macleodii MIT1002 0.35 MIT1002_00131 Quaternary ammonium compound-resistance protein SugE 0.49 MIT1002_02460 Alcohol dehydrogenase YqhD low > 70
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU1996 quaternary ammonium compound-resistance protein QacC, putative (TIGR) 0.41 DVU2201 b3011 alcohol dehydrogenase, iron-containing (TIGR) low > 55
Dickeya dianthicola 67-19 0.34 HGI48_RS06305 multidrug efflux SMR transporter 0.46 HGI48_RS01695 alcohol dehydrogenase low > 71
Acidovorax sp. GW101-3H11 0.34 Ac3H11_2948 Ethidium bromide-methyl viologen resistance protein EmrE 0.44 Ac3H11_4515 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) low > 79
Dickeya dadantii 3937 0.33 DDA3937_RS06260 multidrug efflux SMR transporter 0.46 DDA3937_RS01800 alcohol dehydrogenase low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS06650 multidrug transporter 0.46 DZA65_RS01770 alcohol dehydrogenase low > 75
Cellulophaga baltica 18 0.32 M666_RS05290 multidrug efflux SMR transporter 0.44 M666_RS16825 iron-containing alcohol dehydrogenase low > 67
Bacteroides ovatus ATCC 8483 0.32 BACOVA_03054 multidrug resistance protein, SMR family 0.39 BACOVA_03776 alcohol dehydrogenase, iron-dependent low > 96
Bacteroides thetaiotaomicron VPI-5482 0.32 BT1388 integral membrane protein (NCBI ptt file) 0.39 BT0535 iron-containing alcohol dehydrogenase (NCBI ptt file) low > 81

Not shown: 60 genomes with orthologs for CSW01_06990 only; 5 genomes with orthologs for CSW01_17690 only