Conservation of cofitness between CSW01_08150 and CSW01_16835 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08150 agglutination protein 1.0 CSW01_16835 catabolite repressor/activator 0.73 17
Pectobacterium carotovorum WPP14 0.33 HER17_RS05865 TolC family outer membrane protein 0.41 HER17_RS03105 catabolite repressor/activator low > 75
Pseudomonas sp. RS175 0.30 PFR28_00783 Outer membrane efflux protein BepC 0.45 PFR28_00104 Catabolite repressor/activator low > 88
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_04070 channel protein TolC 0.45 AO356_07340 transcriptional regulator low > 104
Pseudomonas sp. DMC3 0.30 GFF2376 Outer membrane efflux protein BepC 0.44 GFF5002 Catabolite repressor/activator low > 89
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_00511 Outer membrane efflux protein BepC 0.39 GEMAOFIL_00996 Catabolite repressor/activator low > 96
Pseudomonas sp. SVBP6 0.30 COO64_RS12350 TolC family outer membrane protein 0.45 COO64_RS11270 cra catabolite repressor/activator low > 93
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_520 Type I secretion system, outer membrane component LapE # AggA 0.45 Pf1N1B4_1147 Fructose repressor FruR, LacI family low > 87
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_4430 Type I secretion system, outer membrane component LapE 0.42 PfGW456L13_5077 Fructose repressor FruR, LacI family low > 87
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_11185 channel protein TolC 0.45 AO353_05490 transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2650 Type I secretion system, outer membrane component LapE # AggA 0.45 Pf6N2E2_3340 Fructose repressor FruR, LacI family low > 103
Pseudomonas orientalis W4I3 0.28 QF045_RS03610 TolC family outer membrane protein 0.43 QF045_RS06935 catabolite repressor/activator low > 93
Pseudomonas putida KT2440 0.28 PP_4519 Agglutination protein 0.41 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator low > 96
Pseudomonas sp. BP01 0.28 JOY50_RS01170 TolC family outer membrane protein 0.41 JOY50_RS19320 cra catabolite repressor/activator low > 84
Pantoea sp. MT58 0.13 IAI47_06500 TolC family outer membrane protein 0.41 IAI47_15980 catabolite repressor/activator low > 76
Pseudomonas aeruginosa PA14 0.13 IKLFDK_09145 TolC family protein 0.44 IKLFDK_18185 catabolite repressor/activator low > 98
Pseudomonas aeruginosa MRSN321 0.13 DY961_RS21125 TolC family protein 0.44 DY961_RS15195 cra;go_function=DNA catabolite repressor/activator low > 100
Pseudomonas aeruginosa PUPa3 0.13 DQ20_RS55195 TolC family protein 0.44 DQ20_RS41950 cra;go_function=DNA catabolite repressor/activator low > 101
Pantoea agglomerans CFBP13505 P0401 0.12 PagCFBP13505_RS00485 TolC family outer membrane protein 0.41 PagCFBP13505_RS13020 catabolite repressor/activator low > 74
Escherichia coli ECOR38 0.12 HEPCGN_06695 tolC transporter 0.41 HEPCGN_08665 cra catabolite repressor/activator low > 88
Escherichia coli ECRC98 0.12 JDDGAC_11705 tolC transporter 0.41 JDDGAC_14280 cra catabolite repressor/activator low > 87
Escherichia coli ECRC99 0.12 KEDOAH_19910 tolC transporter 0.41 KEDOAH_17470 cra catabolite repressor/activator — —
Escherichia coli ECRC100 0.12 OKFHMN_08060 tolC transporter 0.41 OKFHMN_10685 cra catabolite repressor/activator low > 79
Escherichia coli ECRC101 0.12 MCAODC_27280 tolC transporter 0.41 MCAODC_01200 cra catabolite repressor/activator low > 87
Escherichia coli ECRC102 0.12 NIAGMN_06110 tolC transporter 0.41 NIAGMN_08535 cra catabolite repressor/activator low > 80
Rahnella sp. WP5 0.11 EX31_RS19265 TolC family outer membrane protein 0.42 EX31_RS03655 catabolite repressor/activator low > 89
Enterobacter sp. TBS_079 0.10 MPMX20_02199 Outer membrane efflux protein BepC 0.42 MPMX20_00773 Catabolite repressor/activator low > 85
Enterobacter asburiae PDN3 0.10 EX28DRAFT_1346 type I secretion outer membrane protein, TolC family 0.42 EX28DRAFT_3675 transcriptional regulator, LacI family low > 76

Not shown: 22 genomes with orthologs for CSW01_08150 only; 24 genomes with orthologs for CSW01_16835 only