Conservation of cofitness between CSW01_00740 and CSW01_14890 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00740 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1.0 CSW01_14890 peptidase T 0.47 19
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00238 Ribosomal RNA small subunit methyltransferase D 0.58 OHPLBJKB_02541 Peptidase T low > 73
Escherichia coli BL21 0.57 ECD_03314 16S rRNA m(2)G966 methyltransferase, SAM-dependent 0.58 ECD_01125 peptidase T low > 61
Escherichia coli ECOR38 0.56 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 HEPCGN_24080 pepT peptidase T low > 87
Escherichia fergusonii Becca 0.56 EFB2_00351 Ribosomal RNA small subunit methyltransferase D 0.58 EFB2_02848 Peptidase T 0.64 62
Escherichia coli ECOR27 0.56 NOLOHH_08500 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 NOLOHH_20930 pepT peptidase T low > 75
Escherichia coli ECRC62 0.56 BNILDI_03015 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 BNILDI_19095 pepT peptidase T low > 75
Escherichia coli BW25113 0.56 b3465 yhhF predicted methyltransferase (NCBI) 0.58 b1127 pepT peptidase T (NCBI) low > 76
Escherichia coli Nissle 1917 0.56 ECOLIN_RS19815 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 ECOLIN_RS06495 peptidase T low > 55
Escherichia coli ECRC102 0.56 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 NIAGMN_24755 pepT peptidase T — —
Escherichia coli ECRC98 0.56 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 JDDGAC_06735 pepT peptidase T low > 86
Escherichia coli ECRC99 0.56 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 KEDOAH_24715 pepT peptidase T — —
Escherichia coli ECRC101 0.56 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 MCAODC_22455 pepT peptidase T low > 87
Escherichia coli ECRC100 0.56 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 OKFHMN_00630 pepT peptidase T low > 80
Pectobacterium carotovorum WPP14 0.56 HER17_RS00465 16S rRNA (guanine(966)-N(2))-methyltransferase 0.59 HER17_RS11655 peptidase T low > 75
Enterobacter asburiae PDN3 0.54 EX28DRAFT_4299 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.58 EX28DRAFT_1803 peptidase T low > 76
Erwinia tracheiphila SCR3 0.54 LU632_RS19285 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.57 LU632_RS14605 pepT peptidase T low > 74
Enterobacter sp. TBS_079 0.54 MPMX20_04342 Ribosomal RNA small subunit methyltransferase D 0.58 MPMX20_01808 Peptidase T low > 85
Klebsiella michiganensis M5al 0.53 BWI76_RS26405 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 BWI76_RS11265 peptidase T low > 92
Dickeya dadantii 3937 0.53 DDA3937_RS00630 16S rRNA (guanine(966)-N(2))-methyltransferase 0.60 DDA3937_RS11515 peptidase T low > 74
Dickeya dianthicola 67-19 0.53 HGI48_RS20760 16S rRNA (guanine(966)-N(2))-methyltransferase 0.60 HGI48_RS11560 peptidase T low > 71
Serratia liquefaciens MT49 0.53 IAI46_00920 16S rRNA (guanine(966)-N(2))-methyltransferase 0.60 IAI46_10375 peptidase T low > 86
Dickeya dianthicola ME23 0.52 DZA65_RS21770 16S rRNA (guanine(966)-N(2))-methyltransferase 0.60 DZA65_RS11895 peptidase T low > 75
Pantoea sp. MT58 0.52 IAI47_01535 16S rRNA (guanine(966)-N(2))-methyltransferase 0.58 IAI47_11945 peptidase T low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) 0.57 GFF3411 Tripeptide aminopeptidase (EC 3.4.11.4) low > 78
Rahnella sp. WP5 0.51 EX31_RS14835 16S rRNA (guanine(966)-N(2))-methyltransferase 0.60 EX31_RS24545 peptidase T low > 89
Erwinia amylovora T8 0.49 OLJFJH_04385 16S rRNA (guanine(966)-N(2))-methyltransferase 0.30 OLJFJH_13975 peptidase T low > 58
Shewanella loihica PV-4 0.46 Shew_3607 putative methyltransferase (RefSeq) 0.52 Shew_3250 peptidase T (RefSeq) low > 60
Bosea sp. OAE506 0.24 ABIE41_RS23215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.33 ABIE41_RS10330 peptidase T low > 77
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS04100 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.51 HMPREF1078_RS10425 peptidase T low > 61
Rhizobium sp. OAE497 0.22 ABIE40_RS03765 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.44 ABIE40_RS25635 peptidase T low > 107
Bacteroides ovatus ATCC 8483 0.21 BACOVA_04638 putative RNA methyltransferase, RsmD family 0.53 BACOVA_05377 peptidase T low > 94
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS14025 RsmD family RNA methyltransferase 0.51 HMPREF1058_RS04680 peptidase T low > 67
Cellulophaga baltica 18 0.21 M666_RS11520 RsmD family RNA methyltransferase 0.51 M666_RS19120 peptidase T low > 67
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS09675 RsmD family RNA methyltransferase 0.52 ABI39_RS18955 peptidase T low > 72
Bacteroides thetaiotaomicron VPI-5482 0.21 BT3979 putative methyltransferase (NCBI ptt file) 0.53 BT4583 peptidase T (tripeptide aminopeptidase) (NCBI ptt file) low > 81
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS07045 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.42 ABZR88_RS16300 peptidase T low > 71

Not shown: 56 genomes with orthologs for CSW01_00740 only; 5 genomes with orthologs for CSW01_14890 only