Conservation of cofitness between CSW01_04625 and CSW01_12225 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04625 SecY-interacting protein 1.0 CSW01_12225 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.49 8
Dickeya dadantii 3937 0.49 DDA3937_RS05075 SecY-interacting protein 0.63 DDA3937_RS17930 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 74
Dickeya dianthicola 67-19 0.48 HGI48_RS05075 SecY-interacting protein 0.63 HGI48_RS17855 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 71
Dickeya dianthicola ME23 0.47 DZA65_RS05415 SecY-interacting protein 0.63 DZA65_RS19005 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Pectobacterium carotovorum WPP14 0.47 HER17_RS16385 SecY-interacting protein 0.63 HER17_RS03285 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Serratia liquefaciens MT49 0.45 IAI46_20315 SecY-interacting protein 0.70 IAI46_21330 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 87
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS16915 SecY-interacting protein 0.64 PagCFBP13505_RS13185 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 74
Pantoea sp. MT58 0.45 IAI47_04055 SecY-interacting protein 0.64 IAI47_15815 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF4848 Syd protein 0.61 GFF123 Transcriptional repressor for pyruvate dehydrogenase complex low > 78
Klebsiella pneumoniae MKP103 0.44 KDGMDA_03390 SecY-interacting protein 0.61 KDGMDA_13110 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 95
Erwinia amylovora T8 0.44 OLJFJH_09200 SecY-interacting protein 0.63 OLJFJH_01000 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 58
Rahnella sp. WP5 0.43 EX31_RS13080 SecY-interacting protein 0.67 EX31_RS03485 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 89
Klebsiella michiganensis M5al 0.42 BWI76_RS22860 SecY-interacting protein 0.61 BWI76_RS04875 transcriptional regulator PdhR low > 92
Enterobacter sp. TBS_079 0.41 MPMX20_03663 Protein Syd 0.62 MPMX20_00806 Pyruvate dehydrogenase complex repressor low > 85
Enterobacter asburiae PDN3 0.41 EX28DRAFT_2875 Syd protein (SUKH-2) 0.62 EX28DRAFT_3708 Transcriptional regulators low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_00938 Protein Syd 0.61 OHPLBJKB_03548 Pyruvate dehydrogenase complex repressor low > 74
Escherichia coli ECOR38 0.40 HEPCGN_19450 syd SecY-interacting protein 0.61 HEPCGN_08490 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 88
Escherichia coli BW25113 0.40 b2793 syd SecY interacting protein Syd (NCBI) 0.61 b0113 pdhR transcriptional regulator of pyruvate dehydrogenase complex (NCBI) low > 76
Escherichia coli Nissle 1917 0.40 ECOLIN_RS15575 SecY-interacting protein 0.61 ECOLIN_RS00635 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 55
Escherichia coli ECOR27 0.40 NOLOHH_12075 syd SecY-interacting protein 0.61 NOLOHH_02855 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 76
Escherichia coli BL21 0.40 ECD_02638 SecY-interacting protein 0.61 ECD_00112 pyruvate dehydrogenase complex repressor; autorepressor low > 61
Escherichia fergusonii Becca 0.40 EFB2_01124 Protein Syd 0.61 EFB2_03932 Pyruvate dehydrogenase complex repressor low > 86
Escherichia coli ECRC62 0.40 BNILDI_10580 syd SecY-interacting protein 0.61 BNILDI_08755 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Escherichia coli ECRC100 0.40 OKFHMN_20195 syd SecY-interacting protein 0.61 OKFHMN_10510 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 79
Escherichia coli ECRC102 0.40 NIAGMN_17965 syd SecY-interacting protein 0.61 NIAGMN_08360 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 80
Escherichia coli ECRC99 0.40 KEDOAH_07935 syd SecY-interacting protein 0.61 KEDOAH_17645 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Escherichia coli ECRC101 0.40 MCAODC_10720 syd SecY-interacting protein 0.61 MCAODC_01025 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 87
Escherichia coli ECRC98 0.40 JDDGAC_23860 syd SecY-interacting protein 0.61 JDDGAC_14105 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 87
Erwinia tracheiphila HP pepo 2.2 0.37 IJEDHG_17305 syd SecY-interacting protein 0.62 IJEDHG_05795 Pyruvate dehydrogenase complex repressor low > 61
Erwinia tracheiphila SCR3 0.37 LU632_RS06285 syd SecY-interacting protein 0.62 LU632_RS03075 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 73
Shewanella oneidensis MR-1 0.28 SO1609 syd syd protein (NCBI ptt file) 0.55 SO0423 pdhR pyruvate dehydrogenase complex repressor (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.27 Shew_2653 SecY interacting protein Syd (RefSeq) 0.56 Shew_3432 pdhR transcriptional regulator PdhR (RefSeq) low > 60
Shewanella amazonensis SB2B 0.27 Sama_1121 SecY interacting protein Syd (RefSeq) 0.56 Sama_0374 pdhR transcriptional regulator PdhR (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.27 MIT1002_00989 SecY interacting protein Syd 0.47 MIT1002_03004 Pyruvate dehydrogenase complex repressor low > 70

Not shown: 0 genomes with orthologs for CSW01_04625 only; 61 genomes with orthologs for CSW01_12225 only