Conservation of cofitness between CSW01_08425 and CSW01_12060 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08425 envelope stress response membrane protein PspC 1.0 CSW01_12060 hypothetical protein 0.58 9
Shewanella oneidensis MR-1 0.38 SO1809 pspC phage shock protein C (NCBI ptt file) 0.60 SO1319 putative transporter, required for glycine utilization (from data) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_2646 phage shock protein C, PspC (RefSeq) 0.59 Shewana3_3055 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.36 Sama_1239 phage shock protein C (RefSeq) 0.59 Sama_0852 hypothetical protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_01145 Phage shock protein C 0.41 MIT1002_04042 putative membrane protein low > 70
Shewanella loihica PV-4 0.33 Shew_2494 phage shock protein C, PspC (RefSeq) 0.58 Shew_1024 hypothetical protein (RefSeq) low > 60
Serratia liquefaciens MT49 0.31 IAI46_13490 envelope stress response membrane protein PspC 0.60 IAI46_03565 TRIC cation channel family protein
Escherichia coli BL21 0.30 ECD_01283 psp operon transcription co-activator 0.58 ECD_00156 UPF0126 family inner membrane protein
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02376 Phage shock protein C 0.58 OHPLBJKB_03505 hypothetical protein low > 74
Escherichia fergusonii Becca 0.30 EFB2_02621 Phage shock protein C 0.58 EFB2_03887 hypothetical protein low > 86
Escherichia coli ECOR27 0.30 NOLOHH_20085 pspC envelope stress response membrane protein PspC 0.58 NOLOHH_02620 yadS UPF0126 inner membrane protein YadS low > 76
Escherichia coli BW25113 0.30 b1306 pspC DNA-binding transcriptional activator (NCBI) 0.58 b0157 yadS conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECRC100 0.30 OKFHMN_02400 pspC envelope stress response membrane protein PspC 0.58 OKFHMN_10275 yadS UPF0126 inner membrane protein YadS
Escherichia coli ECRC62 0.30 BNILDI_18235 pspC envelope stress response membrane protein PspC 0.58 BNILDI_09050 yadS UPF0126 inner membrane protein YadS low > 75
Escherichia coli ECRC102 0.30 NIAGMN_26570 pspC envelope stress response membrane protein PspC 0.58 NIAGMN_08125 yadS UPF0126 inner membrane protein YadS
Escherichia coli ECRC98 0.30 JDDGAC_04945 pspC envelope stress response membrane protein PspC 0.58 JDDGAC_13870 yadS UPF0126 inner membrane protein YadS low > 87
Escherichia coli ECOR38 0.30 HEPCGN_25800 pspC envelope stress response membrane protein PspC 0.58 HEPCGN_08225 yadS UPF0126 inner membrane protein YadS 0.40 4
Escherichia coli Nissle 1917 0.30 ECOLIN_RS07860 envelope stress response membrane protein PspC 0.58 ECOLIN_RS00875 TRIC cation channel family protein
Escherichia coli ECRC99 0.30 KEDOAH_26375 pspC envelope stress response membrane protein PspC 0.58 KEDOAH_17880 yadS UPF0126 inner membrane protein YadS
Escherichia coli ECRC101 0.30 MCAODC_15870 pspC envelope stress response membrane protein PspC 0.58 MCAODC_00790 yadS UPF0126 inner membrane protein YadS low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF2684 Phage shock protein C 0.59 GFF64 Putative inner membrane protein low > 78
Enterobacter sp. TBS_079 0.28 MPMX20_02470 Phage shock protein C 0.63 MPMX20_00843 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.28 EX28DRAFT_0978 phage shock protein C (PspC) family protein 0.63 EX28DRAFT_3746 Predicted membrane protein low > 76
Klebsiella michiganensis M5al 0.26 BWI76_RS12460 envelope stress response membrane protein PspC 0.59 BWI76_RS05160 hypothetical protein low > 92
Klebsiella pneumoniae MKP103 0.26 KDGMDA_19930 envelope stress response membrane protein PspC 0.59 KDGMDA_13405 UPF0126 membrane protein VC_2382 low > 95
Azospirillum brasilense Sp245 0.22 AZOBR_RS02555 transcriptional regulator 0.28 AZOBR_RS19810 membrane protein low > 97
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU2986 pspC phage shock protein C (TIGR) 0.28 DVU2672 glycine transporter (from data) low > 55

Not shown: 11 genomes with orthologs for CSW01_08425 only; 34 genomes with orthologs for CSW01_12060 only