Conservation of cofitness between CSW01_06750 and CSW01_11920 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 1.0 CSW01_11920 NupC/NupG family nucleoside CNT transporter 0.64 19
Shewanella loihica PV-4 0.71 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) 0.66 Shew_2817 nucleoside transporter (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_02982 2-methylaconitate cis-trans isomerase 0.60 H281DRAFT_03110 concentrative nucleoside transporter, CNT family low > 103
Shewanella sp. ANA-3 0.70 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.65 Shewana3_1039 nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) low > 73
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS30140 3-methylitaconate isomerase 0.61 BPHYT_RS21960 nucleoside transporter low > 109
Shewanella oneidensis MR-1 0.70 SO0342 conserved hypothetical protein (NCBI ptt file) 0.65 SO1214 NupC family protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.68 MIT1002_03132 3-methylitaconate isomerase 0.57 MIT1002_03499 Nucleoside permease NupX — —
Shewanella amazonensis SB2B 0.67 Sama_3297 hypothetical protein (RefSeq) 0.66 Sama_0971 nucleoside transporter (RefSeq) low > 62
Klebsiella michiganensis M5al 0.24 BWI76_RS14180 hypothetical protein 0.69 BWI76_RS04125 NupC/NupG family nucleoside CNT transporter low > 92
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_0523 Uncharacterized protein conserved in bacteria 0.48 Ga0059261_2532 Nucleoside permease low > 68
Sphingobium sp. HT1-2 0.22 GFF2872 4-oxalomesaconate tautomerase (EC 5.3.2.8) 0.45 GFF508 Nucleoside permease NupC low > 95
Klebsiella pneumoniae MKP103 0.22 KDGMDA_08375 4-oxalomesaconate tautomerase 0.70 KDGMDA_12395 NupC/NupG family nucleoside CNT transporter low > 95
Escherichia coli Nissle 1917 0.20 ECOLIN_RS04095 4-oxalomesaconate tautomerase 0.47 ECOLIN_RS12660 NupC/NupG family nucleoside CNT transporter — —
Escherichia coli BW25113 0.20 b0769 ybhH hypothetical protein (NCBI) 0.47 b2161 yeiJ predicted nucleoside transporter (NCBI) low > 76
Escherichia coli ECRC62 0.20 BNILDI_21090 ybhH 4-oxalomesaconate tautomerase 0.47 BNILDI_13970 nupX Putative nucleoside permease NupX low > 75
Escherichia fergusonii Becca 0.20 EFB2_03337 Putative isomerase YbhH 0.47 EFB2_01693 Putative pseudouridine transporter low > 86
Escherichia coli ECRC102 0.20 NIAGMN_04715 ybhH 4-oxalomesaconate tautomerase 0.47 NIAGMN_21240 nupX Putative nucleoside permease NupX low > 80
Escherichia coli ECRC101 0.20 MCAODC_25885 ybhH 4-oxalomesaconate tautomerase 0.47 MCAODC_14525 nupX Putative nucleoside permease NupX low > 87
Escherichia coli ECRC99 0.20 KEDOAH_21300 ybhH 4-oxalomesaconate tautomerase 0.47 KEDOAH_04710 nupX Putative nucleoside permease NupX — —
Escherichia coli ECRC98 0.20 JDDGAC_10320 ybhH 4-oxalomesaconate tautomerase 0.47 JDDGAC_27435 nupX Putative nucleoside permease NupX low > 87
Escherichia coli ECOR27 0.20 NOLOHH_23095 ybhH 4-oxalomesaconate tautomerase 0.47 NOLOHH_15035 psuT Putative pseudouridine transporter low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02944 4-oxalomesaconate tautomerase 0.47 OHPLBJKB_01550 Putative nucleoside permease NupX low > 74
Escherichia coli ECRC100 0.20 OKFHMN_06665 ybhH 4-oxalomesaconate tautomerase 0.47 OKFHMN_23475 nupX Putative nucleoside permease NupX low > 79

Not shown: 54 genomes with orthologs for CSW01_06750 only; 4 genomes with orthologs for CSW01_11920 only