Conservation of cofitness between CSW01_03410 and CSW01_11920 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03410 polyribonucleotide nucleotidyltransferase 1.0 CSW01_11920 NupC/NupG family nucleoside CNT transporter 0.87 1
Klebsiella michiganensis M5al 0.77 BWI76_RS25065 polyribonucleotide nucleotidyltransferase 0.69 BWI76_RS04125 NupC/NupG family nucleoside CNT transporter low > 92
Klebsiella pneumoniae MKP103 0.77 KDGMDA_05875 polyribonucleotide nucleotidyltransferase 0.70 KDGMDA_12395 NupC/NupG family nucleoside CNT transporter low > 95
Escherichia coli BW25113 0.77 b3164 pnp polynucleotide phosphorylase/polyadenylase (RefSeq) 0.47 b2161 yeiJ predicted nucleoside transporter (NCBI) low > 76
Escherichia coli BL21 0.77 ECD_03031 polynucleotide phosphorylase/polyadenylase 0.46 ECD_02090 nucleoside permease low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_00536 Polyribonucleotide nucleotidyltransferase 0.47 OHPLBJKB_01550 Putative nucleoside permease NupX low > 74
Escherichia coli ECRC101 0.77 MCAODC_08660 pnp polyribonucleotide nucleotidyltransferase 0.47 MCAODC_14525 nupX Putative nucleoside permease NupX low > 87
Escherichia coli ECRC99 0.77 KEDOAH_10010 pnp polyribonucleotide nucleotidyltransferase 0.47 KEDOAH_04710 nupX Putative nucleoside permease NupX — —
Escherichia coli ECOR38 0.77 HEPCGN_17015 pnp polyribonucleotide nucleotidyltransferase 0.47 HEPCGN_22740 nupX Putative nucleoside permease NupX — —
Escherichia coli ECRC100 0.77 OKFHMN_18140 pnp polyribonucleotide nucleotidyltransferase 0.47 OKFHMN_23475 nupX Putative nucleoside permease NupX low > 79
Escherichia coli ECRC102 0.77 NIAGMN_15900 pnp polyribonucleotide nucleotidyltransferase 0.47 NIAGMN_21240 nupX Putative nucleoside permease NupX — —
Escherichia coli ECRC62 0.77 BNILDI_01595 pnp polyribonucleotide nucleotidyltransferase 0.47 BNILDI_13970 nupX Putative nucleoside permease NupX low > 75
Escherichia coli ECOR27 0.77 NOLOHH_09940 pnp polyribonucleotide nucleotidyltransferase 0.47 NOLOHH_15035 psuT Putative pseudouridine transporter low > 76
Escherichia coli ECRC98 0.77 JDDGAC_21765 pnp polyribonucleotide nucleotidyltransferase 0.47 JDDGAC_27435 nupX Putative nucleoside permease NupX low > 87
Escherichia coli Nissle 1917 0.77 ECOLIN_RS18175 polyribonucleotide nucleotidyltransferase 0.47 ECOLIN_RS12660 NupC/NupG family nucleoside CNT transporter low > 55
Escherichia fergusonii Becca 0.77 EFB2_00659 Polyribonucleotide nucleotidyltransferase 0.47 EFB2_01693 Putative pseudouridine transporter low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS18190 polyribonucleotide nucleotidyltransferase 0.67 HER17_RS19040 NupC/NupG family nucleoside CNT transporter — —
Serratia liquefaciens MT49 0.76 IAI46_01955 polyribonucleotide nucleotidyltransferase 0.69 IAI46_02905 NupC/NupG family nucleoside CNT transporter low > 87
Shewanella loihica PV-4 0.74 Shew_2822 polynucleotide phosphorylase/polyadenylase (RefSeq) 0.66 Shew_2817 nucleoside transporter (RefSeq) — —
Shewanella amazonensis SB2B 0.73 Sama_0966 polynucleotide phosphorylase/polyadenylase (RefSeq) 0.66 Sama_0971 nucleoside transporter (RefSeq) — —
Alteromonas macleodii MIT1002 0.73 MIT1002_01888 Polyribonucleotide nucleotidyltransferase 0.57 MIT1002_03499 Nucleoside permease NupX — —
Shewanella oneidensis MR-1 0.72 SO1209 pnp polyribonucleotide nucleotidyltransferase (NCBI ptt file) 0.65 SO1214 NupC family protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.72 Shewana3_1035 polynucleotide phosphorylase/polyadenylase (RefSeq) 0.65 Shewana3_1039 nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_04562 polyribonucleotide nucleotidyltransferase 0.60 H281DRAFT_03110 concentrative nucleoside transporter, CNT family low > 103
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS06600 polynucleotide phosphorylase/polyadenylase 0.61 BPHYT_RS21960 nucleoside transporter low > 109
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_2140 polyribonucleotide nucleotidyltransferase 0.48 Ga0059261_2532 Nucleoside permease — —
Sphingobium sp. HT1-2 0.53 GFF2343 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.45 GFF508 Nucleoside permease NupC — —

Not shown: 94 genomes with orthologs for CSW01_03410 only; 0 genomes with orthologs for CSW01_11920 only