Conservation of cofitness between CSW01_12555 and CSW01_11290 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12555 phosphoglycerate dehydrogenase 1.0 CSW01_11290 hypothetical protein 0.48 15
Serratia liquefaciens MT49 0.78 IAI46_20900 phosphoglycerate dehydrogenase 0.21 IAI46_08875 porin OmpA — —
Klebsiella pneumoniae MKP103 0.77 KDGMDA_04420 phosphoglycerate dehydrogenase 0.23 KDGMDA_18200 porin OmpA low > 95
Klebsiella michiganensis M5al 0.77 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.22 BWI76_RS09970 porin OmpA low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.20 GFF3248 Outer membrane protein A precursor low > 78
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.21 EX28DRAFT_1986 Outer membrane protein and related peptidoglycan-associated (lipo)proteins — —
Enterobacter sp. TBS_079 0.77 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.22 MPMX20_01607 Outer membrane protein A low > 85
Erwinia amylovora T8 0.76 OLJFJH_08735 phosphoglycerate dehydrogenase 0.22 OLJFJH_15935 porin OmpA — —
Pantoea sp. MT58 0.76 IAI47_03725 phosphoglycerate dehydrogenase 0.22 IAI47_12645 porin OmpA low > 76
Pectobacterium carotovorum WPP14 0.76 HER17_RS02725 phosphoglycerate dehydrogenase 0.19 HER17_RS08420 porin OmpA low > 75
Pantoea agglomerans CFBP13505 P0401 0.76 PagCFBP13505_RS15975 phosphoglycerate dehydrogenase 0.22 PagCFBP13505_RS04685 porin OmpA 0.56 66
Escherichia coli ECRC102 0.76 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.21 NIAGMN_02955 ompA outer membrane protein A low > 80
Escherichia coli ECRC101 0.76 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.21 MCAODC_24625 ompA outer membrane protein A low > 87
Escherichia coli BW25113 0.76 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.21 b0957 ompA outer membrane protein A (3a;II*;G;d) (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.21 OHPLBJKB_02709 Outer membrane protein A low > 74
Escherichia coli ECRC98 0.76 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.21 JDDGAC_08845 ompA outer membrane protein A low > 87
Escherichia coli ECOR27 0.76 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.21 NOLOHH_21790 ompA outer membrane protein A low > 76
Escherichia coli ECRC100 0.76 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.21 OKFHMN_05235 ompA outer membrane protein A low > 79
Escherichia coli ECRC99 0.76 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.21 KEDOAH_22500 ompA outer membrane protein A — —
Escherichia coli BL21 0.76 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.21 ECD_00961 outer membrane protein A (3a low > 61
Escherichia coli ECOR38 0.76 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.20 HEPCGN_23285 ompA outer membrane protein A low > 88
Escherichia coli Nissle 1917 0.76 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.20 ECOLIN_RS05025 porin OmpA low > 55
Erwinia tracheiphila SCR3 0.75 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.21 LU632_RS10010 ompA porin OmpA — —
Escherichia coli ECRC62 0.75 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.21 BNILDI_19955 ompA porin OmpA low > 75
Escherichia fergusonii Becca 0.75 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.21 EFB2_03114 Outer membrane protein A low > 86
Dickeya dadantii 3937 0.75 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.19 DDA3937_RS15245 porin OmpA low > 74
Rahnella sp. WP5 0.75 EX31_RS21470 phosphoglycerate dehydrogenase 0.22 EX31_RS18040 porin OmpA low > 89
Dickeya dianthicola 67-19 0.75 HGI48_RS18400 phosphoglycerate dehydrogenase 0.20 HGI48_RS15320 porin OmpA — —
Erwinia tracheiphila HP pepo 2.2 0.75 IJEDHG_03320 D-3-phosphoglycerate dehydrogenase 0.21 IJEDHG_20525 ompA porin OmpA — —
Dickeya dianthicola ME23 0.75 DZA65_RS19540 phosphoglycerate dehydrogenase 0.20 DZA65_RS16145 porin OmpA — —
Shewanella loihica PV-4 0.74 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.17 Shew_1090 OmpA/MotB domain-containing protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.72 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.23 SOA0114 ompA outer membrane protein A (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.72 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.19 Sama_0914 OmpA/MotB (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases 0.17 B158DRAFT_0638 Outer membrane protein and related peptidoglycan-associated (lipo)proteins low > 40
Pseudomonas sp. S08-1 0.65 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.18 OH686_01625 Nonspecific porin and structural outer membrane protein OprF low > 80

Not shown: 47 genomes with orthologs for CSW01_12555 only; 1 genomes with orthologs for CSW01_11290 only