Conservation of cofitness between CSW01_03200 and CSW01_10280 in Vibrio cholerae E7946 ATCC 55056

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03200 ammonium transporter 1.0 CSW01_10280 heme exporter protein C 0.57 14
Shewanella sp. ANA-3 0.81 Shewana3_3531 Rh family protein/ammonium transporter (RefSeq) 0.67 Shewana3_0229 heme exporter protein CcmC (RefSeq) — —
Shewanella oneidensis MR-1 0.81 SO0760 amt ammonium transporter (NCBI ptt file) 0.66 SO0261 ccmC heme exporter protein CcmC (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.80 Shew_0847 Rh family protein/ammonium transporter (RefSeq) 0.64 Shew_0188 heme exporter protein CcmC (RefSeq) — —
Shewanella amazonensis SB2B 0.79 Sama_0651 Rh-like protein/ammonium transporter (RefSeq) 0.64 Sama_0243 heme exporter protein CcmC (RefSeq) low > 62
Pseudomonas segetis P6 0.64 MPMX49_04539 Ammonia channel 0.49 MPMX49_03110 Heme exporter protein C — —
Pseudomonas stutzeri RCH2 0.64 Psest_3771 probable ammonium transporter, marine subtype 0.55 Psest_1756 heme exporter protein CcmC — —
Pseudomonas sp. S08-1 0.62 OH686_13765 Ammonium transporter 0.50 OH686_02650 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Marinobacter adhaerens HP15 0.60 HP15_274 ammonium/methylammonium permease 0.44 HP15_2284 heme exporter protein CcmC — —
Alteromonas macleodii MIT1002 0.56 MIT1002_00417 Ammonia transporter 0.73 MIT1002_00962 Cytochrome c-type biogenesis protein CcmC — —
Phaeobacter inhibens DSM 17395 0.48 PGA1_c29410 ammonium transporter 0.34 PGA1_c18870 heme exporter protein C — —
Dinoroseobacter shibae DFL-12 0.46 Dshi_0144 ammonium transporter (RefSeq) 0.34 Dshi_1853 heme exporter protein CcmC (RefSeq) — —
Rhodospirillum rubrum S1H 0.29 Rru_A0554 Rh-like protein/ammonium transporter (NCBI) 0.43 Rru_A0038 Cytochrome c-type biogenesis protein CcmC (NCBI) — —
Magnetospirillum magneticum AMB-1 0.24 AMB_RS09935 ammonium transporter 0.45 AMB_RS21235 heme transporter HemC — —
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_01859 Ammonia channel 0.55 GEMAOFIL_01872 Heme exporter protein C — —
Pseudomonas orientalis W4I3 0.23 QF045_RS11350 ammonium transporter 0.54 QF045_RS11415 heme ABC transporter permease low > 93
Pseudomonas fluorescens SBW25 0.22 PFLU_RS08590 ammonium transporter 0.54 PFLU_RS08655 heme ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.22 PS417_08635 ammonium transporter 0.55 PS417_08700 heme ABC transporter permease — —
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS08590 ammonium transporter 0.54 PFLU_RS08655 heme ABC transporter permease low > 109
Dechlorosoma suillum PS 0.22 Dsui_1062 ammonia permease 0.50 Dsui_1169 heme exporter protein CcmC — —
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_19220 ammonium transporter 0.55 AO353_18860 heme ABC transporter permease — —
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_2267 Ammonium transporter 0.55 PfGW456L13_4314 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pseudomonas sp. DMC3 0.22 GFF4581 Ammonia channel 0.56 GFF2487 Heme exporter protein C — —
Pseudomonas sp. SVBP6 0.21 COO64_RS05245 ammonium transporter 0.57 COO64_RS25700 heme ABC transporter permease — —
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_243 Ammonium transporter 0.55 Pf1N1B4_3641 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Serratia liquefaciens MT49 0.21 IAI46_05085 ammonium transporter AmtB 0.61 IAI46_18100 heme ABC transporter permease low > 87
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_03020 ammonium transporter 0.55 AO356_03650 heme ABC transporter permease — —
Pseudomonas aeruginosa MRSN321 0.21 DY961_RS01760 ammonium transporter 0.55 DY961_RS05525 heme ABC transporter permease — —
Pseudomonas aeruginosa PUPa3 0.21 DQ20_RS33815 ammonium transporter 0.55 DQ20_RS47265 heme ABC transporter permease — —
Pseudomonas aeruginosa PA14 0.21 IKLFDK_15465 ammonium transporter 0.55 IKLFDK_07025 Heme exporter protein C — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2430 Ammonium transporter 0.55 Pf6N2E2_2558 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pseudomonas sp. RS175 0.21 PFR28_00998 Ammonia channel 0.54 PFR28_00867 Heme exporter protein C — —
Erwinia amylovora T8 0.20 OLJFJH_17905 ammonium transporter AmtB 0.64 OLJFJH_11085 heme ABC transporter permease low > 58
Pectobacterium carotovorum WPP14 0.20 HER17_RS15785 ammonium transporter AmtB 0.59 HER17_RS09040 heme ABC transporter permease low > 75
Klebsiella pneumoniae MKP103 0.20 KDGMDA_14685 ammonium transporter AmtB 0.59 KDGMDA_23860 heme ABC transporter permease low > 95
Pseudomonas sp. BP01 0.20 JOY50_RS22045 ammonium transporter 0.52 JOY50_RS00495 heme ABC transporter permease — —
Rahnella sp. WP5 0.20 EX31_RS22320 ammonium transporter AmtB 0.66 EX31_RS19760 heme ABC transporter permease low > 89
Pseudomonas putida KT2440 0.20 PP_2106 putative Ammonium transporter 0.53 PP_4325 protoheme IX reservoir complex subunit — —
Escherichia coli Nissle 1917 0.20 ECOLIN_RS02700 ammonium transporter AmtB 0.63 ECOLIN_RS12850 heme exporter protein CcmC low > 55
Escherichia fergusonii Becca 0.20 EFB2_03606 Ammonia channel 0.63 EFB2_01657 Heme exporter protein C low > 86
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU1231 amt ammonium transporter (TIGR) 0.21 DVU1047 ccmC cytochrome c-type biogenesis protein CcmC (TIGR) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF4368 Ammonium transporter 0.64 GFF4880 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Escherichia coli ECRC99 0.19 KEDOAH_19705 amtB ammonium transporter AmtB 0.63 KEDOAH_04895 ccmC heme exporter protein CcmC — —
Escherichia coli ECOR38 0.19 HEPCGN_06875 amtB ammonium transporter AmtB 0.63 HEPCGN_22555 ccmC heme exporter protein CcmC 0.41 20
Escherichia coli ECRC62 0.19 BNILDI_22610 amtB ammonium transporter AmtB 0.63 BNILDI_13785 ccmC heme exporter protein CcmC low > 75
Escherichia coli ECRC98 0.19 JDDGAC_11915 amtB ammonium transporter AmtB 0.63 JDDGAC_27250 ccmC heme exporter protein CcmC low > 87
Escherichia coli BW25113 0.19 b0451 amtB ammonium transporter (NCBI) 0.63 b2199 ccmC heme exporter subunit (NCBI) low > 76
Escherichia coli ECRC102 0.19 NIAGMN_06315 amtB ammonium transporter AmtB 0.63 NIAGMN_21055 ccmC heme exporter protein CcmC low > 80
Escherichia coli ECRC101 0.19 MCAODC_27485 amtB ammonium transporter AmtB 0.63 MCAODC_14340 ccmC heme exporter protein CcmC low > 87
Escherichia coli ECOR27 0.19 NOLOHH_01195 amtB ammonium transporter AmtB 0.63 NOLOHH_14865 ccmC heme exporter protein CcmC 0.29 48
Escherichia coli ECRC100 0.19 OKFHMN_08260 amtB ammonium transporter AmtB 0.63 OKFHMN_23290 ccmC heme exporter protein CcmC low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_03222 Ammonia channel 0.63 OHPLBJKB_01512 Heme exporter protein C low > 74
Escherichia coli BL21 0.19 ECD_00403 ammonium transporter 0.63 ECD_02126 heme export ABC transporter permease; CcmE-interacting protein low > 61
Pantoea sp. MT58 0.19 IAI47_14580 ammonium transporter AmtB 0.64 IAI47_06075 heme ABC transporter permease low > 76
Azospirillum sp. SherDot2 0.19 MPMX19_01885 Ammonia channel 0.47 MPMX19_02530 Heme exporter protein C — —
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS09495 ammonium transporter 0.52 ABZR86_RS06430 heme ABC transporter permease — —
Pantoea agglomerans CFBP13505 P0401 0.19 PagCFBP13505_RS10615 ammonium transporter AmtB 0.64 PagCFBP13505_RS00030 heme ABC transporter permease low > 74
Rhodopseudomonas palustris CGA009 0.18 TX73_001425 ammonium transporter 0.40 TX73_001060 heme ABC transporter permease — —
Azospirillum brasilense Sp245 0.18 AZOBR_RS00845 ammonia channel protein 0.48 AZOBR_RS00725 heme ABC transporter (exporter) permease component — —
Brevundimonas sp. GW460-12-10-14-LB2 0.18 A4249_RS09990 ammonium transporter 0.36 A4249_RS12785 heme ABC transporter permease — —
Rhizobium sp. OAE497 0.18 ABIE40_RS18420 ammonium transporter 0.42 ABIE40_RS18290 heme ABC transporter permease low > 107
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.249.1 Ammonium transporter 0.48 Xcc-8004.2345.1 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Lysobacter sp. OAE881 0.18 ABIE51_RS01435 ammonium transporter 0.44 ABIE51_RS08715 heme ABC transporter permease CcmC low > 62
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_2277 ammonium transporter 0.54 Psyr_3391 Cytochrome c-type biogenesis protein CcmC — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_2277 ammonium transporter 0.54 Psyr_3391 Cytochrome c-type biogenesis protein CcmC — —
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS08110 ammonium transporter 0.49 LRK54_RS16080 heme ABC transporter permease — —
Rhodanobacter denitrificans MT42 0.17 LRK55_RS07860 ammonium transporter 0.49 LRK55_RS15830 heme ABC transporter permease — —
Rhodanobacter sp000427505 FW510-R12 0.17 LRK53_RS00315 ammonium transporter 0.50 LRK53_RS12715 heme ABC transporter permease — —
Sinorhizobium meliloti 1021 0.16 SMc03807 ammonium transporter 0.45 SMc03849 heme exporter C (cytochrome C-type biogenesis protein) transmembrane low > 103
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_2256 ammonium transporter 0.36 Ga0059261_0175 heme exporter protein CcmC low > 68
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_14925 Ammonium transporter 0.50 OKGIIK_08570 ccmC heme ABC transporter permease — —
Bosea sp. OAE506 0.15 ABIE41_RS04755 ammonium transporter 0.42 ABIE41_RS04985 heme ABC transporter permease — —
Sphingobium sp. HT1-2 0.15 GFF785 Ammonium transporter 0.37 GFF80 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Agrobacterium fabrum C58 0.14 Atu2758 ammonium transporter 0.44 Atu2688 ABC transporter, membrane spanning protein (heme) — —
Caulobacter crescentus NA1000 0.14 CCNA_01399 ammonium transporter/methylammonium transporter 0.40 CCNA_03786 heme chaperone heme-lyase low > 66
Caulobacter crescentus NA1000 Δfur 0.14 CCNA_01399 ammonium transporter/methylammonium transporter 0.40 CCNA_03786 heme chaperone heme-lyase low > 67
Xanthobacter sp. DMC5 0.11 GFF3985 Ammonia channel 0.39 GFF971 Heme exporter protein C — —

Not shown: 44 genomes with orthologs for CSW01_03200 only; 1 genomes with orthologs for CSW01_10280 only