Conservation of cofitness between CSW01_05770 and CSW01_10200 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05770 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 1.0 CSW01_10200 DUF3413 domain-containing protein 0.47 8
Escherichia coli BL21 0.68 ECD_01926 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase 0.38 ECD_02118 essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor low > 61
Escherichia fergusonii Becca 0.68 EFB2_01832 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.38 EFB2_01668 Inner membrane protein YejM low > 86
Escherichia coli ECOR27 0.68 NOLOHH_15810 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.38 NOLOHH_14910 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 75
Escherichia coli ECRC62 0.68 BNILDI_14720 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.38 BNILDI_13830 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 75
Escherichia coli ECOR38 0.68 HEPCGN_03200 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.38 HEPCGN_22600 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 88
Pectobacterium carotovorum WPP14 0.68 HER17_RS12250 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.37 HER17_RS12985 LPS biosynthesis-modulating metalloenzyme YejM low > 75
Serratia liquefaciens MT49 0.68 IAI46_08190 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.40 IAI46_17370 DUF3413 domain-containing protein low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_01676 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.38 OHPLBJKB_01521 Inner membrane protein YejM low > 74
Escherichia coli ECRC98 0.67 JDDGAC_28605 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.38 JDDGAC_27295 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 87
Escherichia coli Nissle 1917 0.67 ECOLIN_RS11965 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.38 ECOLIN_RS12785 LPS biosynthesis-modulating metalloenzyme YejM — —
Escherichia coli ECRC100 0.67 OKFHMN_24495 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.38 OKFHMN_23335 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 79
Escherichia coli ECRC102 0.67 NIAGMN_22440 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.38 NIAGMN_21100 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 80
Escherichia coli ECRC101 0.67 MCAODC_20445 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.38 MCAODC_14385 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 87
Escherichia coli ECRC99 0.67 KEDOAH_03655 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.38 KEDOAH_04850 yejM LPS biosynthesis-modulating metalloenzyme YejM — —
Dickeya dianthicola 67-19 0.67 HGI48_RS09725 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.36 HGI48_RS09155 DUF3413 domain-containing protein — —
Dickeya dianthicola ME23 0.67 DZA65_RS10035 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.36 DZA65_RS09455 DUF3413 domain-containing protein — —
Dickeya dadantii 3937 0.67 DDA3937_RS09715 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.37 DDA3937_RS09115 DUF3413 domain-containing protein low > 74
Escherichia coli BW25113 0.67 b2024 hisA N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) 0.38 b2188 yejM predicted hydrolase, inner membrane (NCBI) low > 76
Enterobacter asburiae PDN3 0.67 EX28DRAFT_0535 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) 0.37 EX28DRAFT_0373 Predicted hydrolase of alkaline phosphatase superfamily low > 76
Klebsiella pneumoniae MKP103 0.67 KDGMDA_26115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 0.38 KDGMDA_26795 LPS biosynthesis-modulating metalloenzyme YejM low > 94
Klebsiella pneumoniae MRSN742743 0.67 GJGHJB_01686 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 0.38 GJGHJB_01542 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 83
Enterobacter sp. TBS_079 0.66 MPMX20_03006 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.37 MPMX20_03154 Inner membrane protein YejM low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF3908 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) 0.38 GFF3747 FIG001881: hydrolase of alkaline phosphatase superfamily low > 78
Klebsiella michiganensis M5al 0.66 BWI76_RS18945 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase 0.37 BWI76_RS19845 phosphatase — —
Rahnella sp. WP5 0.66 EX31_RS11460 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.38 EX31_RS19220 DUF3413 domain-containing protein low > 89
Erwinia tracheiphila SCR3 0.65 LU632_RS08925 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.38 LU632_RS17620 yejM LPS biosynthesis-modulating metalloenzyme YejM — —
Erwinia tracheiphila HP pepo 2.2 0.65 IJEDHG_19070 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 0.38 IJEDHG_16010 yejM LPS biosynthesis-modulating metalloenzyme YejM — —
Erwinia amylovora T8 0.64 OLJFJH_12160 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 0.38 OLJFJH_11685 LPS biosynthesis-modulating metalloenzyme YejM low > 58
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13516_RS07455 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.38 PagCFBP13516_RS06920 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 80
Pantoea sp. MT58 0.63 IAI47_07070 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.38 IAI47_06560 DUF3413 domain-containing protein low > 76
Shewanella sp. ANA-3 0.59 Shewana3_1849 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) 0.30 Shewana3_2428 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.58 Shew_2202 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) 0.28 Shew_1470 sulfatase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.58 SO2069 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (NCBI ptt file) 0.30 SO2175 conserved hypothetical protein (NCBI ptt file) low > 76

Not shown: 55 genomes with orthologs for CSW01_05770 only; 0 genomes with orthologs for CSW01_10200 only