Conservation of cofitness between CSW01_06215 and CSW01_10020 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06215 phosphoribosylglycinamide formyltransferase 2 1.0 CSW01_10020 ROK family protein 0.74 3
Escherichia fergusonii Becca 0.71 EFB2_02094 Formate-dependent phosphoribosylglycinamide formyltransferase 0.47 EFB2_02398 Protein mlc low > 86
Escherichia coli ECRC62 0.71 BNILDI_15655 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 BNILDI_17035 mlc DNA-binding transcriptional repressor Mlc low > 75
Escherichia coli BL21 0.71 ECD_01820 phosphoribosylglycinamide formyltransferase 2 0.46 ECD_01563 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_01880 Formate-dependent phosphoribosylglycinamide formyltransferase 0.46 OHPLBJKB_02132 Protein mlc low > 73
Escherichia coli BW25113 0.70 b1849 purT phosphoribosylglycinamide formyltransferase 2 (NCBI) 0.46 b1594 dgsA DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECOR27 0.70 NOLOHH_16860 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 NOLOHH_18245 mlc DNA-binding transcriptional repressor Mlc low > 75
Escherichia coli ECRC102 0.70 NIAGMN_01710 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 NIAGMN_00335 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli ECRC98 0.70 JDDGAC_00925 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 JDDGAC_02330 mlc DNA-binding transcriptional repressor Mlc low > 86
Escherichia coli ECRC101 0.70 MCAODC_19055 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 MCAODC_17670 mlc DNA-binding transcriptional repressor Mlc low > 87
Escherichia coli ECOR38 0.70 HEPCGN_04755 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 HEPCGN_06115 mlc DNA-binding transcriptional repressor Mlc low > 87
Escherichia coli ECRC100 0.70 OKFHMN_26350 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 OKFHMN_27740 mlc DNA-binding transcriptional repressor Mlc low > 80
Escherichia coli ECRC99 0.70 KEDOAH_01755 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 KEDOAH_00365 mlc DNA-binding transcriptional repressor Mlc — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF1628 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.47 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon low > 78
Erwinia amylovora T8 0.70 OLJFJH_12905 formate-dependent phosphoribosylglycinamide formyltransferase 0.48 OLJFJH_14275 transcriptional regulator low > 58
Dickeya dianthicola ME23 0.69 DZA65_RS10590 formate-dependent phosphoribosylglycinamide formyltransferase 0.49 DZA65_RS11145 ROK family transcriptional regulator low > 75
Erwinia tracheiphila SCR3 0.69 LU632_RS13350 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 LU632_RS12305 ROK family transcriptional regulator low > 74
Klebsiella michiganensis M5al 0.69 BWI76_RS18090 phosphoribosylglycinamide formyltransferase 2 0.47 BWI76_RS15955 transcriptional regulator low > 92
Dickeya dadantii 3937 0.69 DDA3937_RS10145 formate-dependent phosphoribosylglycinamide formyltransferase 0.50 DDA3937_RS10675 ROK family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.69 HGI48_RS10175 formate-dependent phosphoribosylglycinamide formyltransferase 0.49 HGI48_RS10675 ROK family transcriptional regulator low > 71
Pectobacterium carotovorum WPP14 0.68 HER17_RS11770 formate-dependent phosphoribosylglycinamide formyltransferase 0.50 HER17_RS10735 ROK family transcriptional regulator low > 75
Serratia liquefaciens MT49 0.68 IAI46_14770 formate-dependent phosphoribosylglycinamide formyltransferase 0.50 IAI46_11685 ROK family transcriptional regulator low > 86
Pantoea sp. MT58 0.68 IAI47_08505 formate-dependent phosphoribosylglycinamide formyltransferase 0.45 IAI47_09750 ROK family transcriptional regulator low > 76
Rahnella sp. WP5 0.67 EX31_RS24735 formate-dependent phosphoribosylglycinamide formyltransferase 0.50 EX31_RS16985 ROK family transcriptional regulator low > 89
Enterobacter sp. TBS_079 0.67 MPMX20_02754 Formate-dependent phosphoribosylglycinamide formyltransferase 0.47 MPMX20_02063 Protein mlc low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0707 formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) 0.48 EX28DRAFT_1493 Transcriptional regulator/sugar kinase low > 76
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS10980 formate-dependent phosphoribosylglycinamide formyltransferase 0.19 HMPREF1078_RS06205 ROK family transcriptional regulator low > 61
Azospirillum brasilense Sp245 0.53 AZOBR_RS29810 phosphoribosylglycinamide formyltransferase 0.17 AZOBR_RS27950 transcriptional regulator low > 97
Variovorax sp. OAS795 0.52 ABID97_RS00805 formate-dependent phosphoribosylglycinamide formyltransferase 0.17 ABID97_RS00440 ROK family protein low > 91
Bacteroides ovatus ATCC 8483 0.44 BACOVA_02411 phosphoribosylglycinamide formyltransferase 2 0.18 BACOVA_01791 hypothetical protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.44 BT0704 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) 0.17 BT0433 putative xylose repressor (NCBI ptt file) — —
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS16250 formate-dependent phosphoribosylglycinamide formyltransferase 0.17 HMPREF1181_RS04110 ROK family transcriptional regulator low > 56
Bifidobacterium breve UCC2003 0.44 BBR_RS13455 formate-dependent phosphoribosylglycinamide formyltransferase 0.18 BBR_RS16880 ROK family transcriptional regulator low > 34
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS14185 formate-dependent phosphoribosylglycinamide formyltransferase 0.18 ABI39_RS21185 ROK family transcriptional regulator low > 72
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS17920 formate-dependent phosphoribosylglycinamide formyltransferase 0.18 HMPREF1058_RS07285 ROK family transcriptional regulator low > 67

Not shown: 51 genomes with orthologs for CSW01_06215 only; 8 genomes with orthologs for CSW01_10020 only