Conservation of cofitness between CSW01_11345 and CSW01_09860 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11345 uracil phosphoribosyltransferase 1.0 CSW01_09860 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 0.82 3
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) 0.37 EX28DRAFT_0340 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase low > 76
Shewanella loihica PV-4 0.91 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) 0.34 Shew_3599 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase (RefSeq) low > 60
Rahnella sp. WP5 0.90 EX31_RS22700 uracil phosphoribosyltransferase 0.38 EX31_RS19355 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 89
Enterobacter sp. TBS_079 0.90 MPMX20_03352 Uracil phosphoribosyltransferase 0.36 MPMX20_03200 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase low > 85
Serratia liquefaciens MT49 0.90 IAI46_18880 uracil phosphoribosyltransferase 0.38 IAI46_17560 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 87
Shewanella sp. ANA-3 0.90 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) 0.34 Shewana3_3965 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.89 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) 0.35 SO4573 menD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.89 BWI76_RS20945 uracil phosphoribosyltransferase 0.36 BWI76_RS20075 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 92
Shewanella amazonensis SB2B 0.89 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) 0.34 Sama_3460 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase (RefSeq) low > 62
Klebsiella pneumoniae MKP103 0.89 KDGMDA_27790 uracil phosphoribosyltransferase 0.36 KDGMDA_26990 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase low > 94
Klebsiella pneumoniae MRSN742743 0.89 GJGHJB_01344 upp uracil phosphoribosyltransferase 0.37 GJGHJB_01504 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase low > 83
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_01228 Uracil phosphoribosyltransferase 0.36 OHPLBJKB_01446 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase low > 74
Escherichia coli ECRC100 0.89 OKFHMN_21815 upp uracil phosphoribosyltransferase 0.37 OKFHMN_22935 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 79
Escherichia coli BW25113 0.89 b2498 upp uracil phosphoribosyltransferase (VIMSS) 0.36 b2264 menD 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) low > 76
Escherichia coli ECOR38 0.89 HEPCGN_20980 upp uracil phosphoribosyltransferase 0.36 HEPCGN_22150 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase 0.59 30
Escherichia coli ECOR27 0.89 NOLOHH_13465 upp uracil phosphoribosyltransferase 0.36 NOLOHH_14560 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 75
Escherichia coli ECRC99 0.89 KEDOAH_06405 upp uracil phosphoribosyltransferase 0.37 KEDOAH_05260 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase — —
Escherichia coli Nissle 1917 0.89 ECOLIN_RS14185 uracil phosphoribosyltransferase 0.37 ECOLIN_RS13185 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 55
Escherichia coli ECRC98 0.89 JDDGAC_25760 upp uracil phosphoribosyltransferase 0.37 JDDGAC_26900 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 87
Escherichia coli ECRC101 0.89 MCAODC_12345 upp uracil phosphoribosyltransferase 0.37 MCAODC_13975 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 87
Pectobacterium carotovorum WPP14 0.89 HER17_RS15460 uracil phosphoribosyltransferase 0.39 HER17_RS15555 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 75
Escherichia fergusonii Becca 0.89 EFB2_01400 Uracil phosphoribosyltransferase 0.37 EFB2_01591 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase low > 86
Escherichia coli ECRC102 0.89 NIAGMN_19585 upp uracil phosphoribosyltransferase 0.37 NIAGMN_20705 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 80
Escherichia coli BL21 0.89 ECD_02390 uracil phosphoribosyltransferase 0.36 ECD_02191 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase low > 61
Escherichia coli ECRC62 0.89 BNILDI_12275 upp uracil phosphoribosyltransferase 0.36 BNILDI_13475 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.36 GFF1870 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) low > 78
Erwinia tracheiphila SCR3 0.88 LU632_RS08280 upp uracil phosphoribosyltransferase 0.36 LU632_RS08105 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase 0.35 46
Erwinia tracheiphila HP pepo 2.2 0.88 IJEDHG_18370 upp uracil phosphoribosyltransferase 0.36 IJEDHG_18170 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase low > 61
Dickeya dianthicola ME23 0.88 DZA65_RS06425 uracil phosphoribosyltransferase 0.39 DZA65_RS06295 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 75
Dickeya dadantii 3937 0.88 DDA3937_RS06030 uracil phosphoribosyltransferase 0.38 DDA3937_RS05915 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 74
Dickeya dianthicola 67-19 0.87 HGI48_RS06075 uracil phosphoribosyltransferase 0.39 HGI48_RS05960 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 71

Not shown: 77 genomes with orthologs for CSW01_11345 only; 0 genomes with orthologs for CSW01_09860 only