Conservation of cofitness between CSW01_13830 and CSW01_08440 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13830 YihY/virulence factor BrkB family protein 1.0 CSW01_08440 phage shock protein operon transcriptional activator 0.40 19
Shewanella oneidensis MR-1 0.51 SO4401 rbn ribonuclease BN (NCBI ptt file) 0.59 SO1806 pspF psp operon transcriptional activator (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.49 Shew_3545 rbn ribonuclease BN (RefSeq) 0.58 Shew_2497 sigma-54 dependent trancsriptional regulator (RefSeq) low > 60
Shewanella amazonensis SB2B 0.45 Sama_3404 rbn ribonuclease BN (RefSeq) 0.56 Sama_1236 psp operon transcriptional activator (RefSeq) low > 62
Serratia liquefaciens MT49 0.44 IAI46_24935 virulence factor BrkB family protein 0.60 IAI46_13505 phage shock protein operon transcriptional activator low > 87
Alteromonas macleodii MIT1002 0.44 MIT1002_03671 ribonuclease BN/unknown domain fusion protein 0.50 MIT1002_01142 Phage shock protein F low > 70
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4368 Predicted membrane protein 0.59 EX28DRAFT_0975 psp operon transcriptional activator PspF low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_04583 hypothetical protein 0.59 MPMX20_02473 Psp operon transcriptional activator low > 85
Klebsiella pneumoniae MKP103 0.42 KDGMDA_09030 virulence factor BrkB family protein 0.60 KDGMDA_19915 phage shock protein operon transcriptional activator low > 95
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS18870 virulence factor BrkB family protein 0.60 PagCFBP13505_RS06760 phage shock protein operon transcriptional activator low > 74
Rahnella sp. WP5 0.41 EX31_RS15855 virulence factor BrkB family protein 0.59 EX31_RS15690 phage shock protein operon transcriptional activator low > 89
Klebsiella michiganensis M5al 0.41 BWI76_RS00420 hypothetical protein 0.61 BWI76_RS12445 phage shock protein operon transcriptional activator low > 92
Pantoea sp. MT58 0.41 IAI47_00475 virulence factor BrkB family protein 0.59 IAI47_09390 phage shock protein operon transcriptional activator low > 76
Escherichia coli ECRC62 0.41 BNILDI_05390 yihY virulence factor BrkB family protein 0.61 BNILDI_18250 pspF phage shock protein operon transcriptional activator low > 75
Escherichia coli ECRC102 0.41 NIAGMN_11760 yihY virulence factor BrkB family protein 0.61 NIAGMN_26585 pspF phage shock protein operon transcriptional activator — —
Escherichia fergusonii Becca 0.41 EFB2_04732 hypothetical protein 0.61 EFB2_02624 Psp operon transcriptional activator low > 86
Escherichia coli Nissle 1917 0.41 ECOLIN_RS22380 virulence factor BrkB family protein 0.61 ECOLIN_RS07845 phage shock protein operon transcriptional activator — —
Escherichia coli ECRC101 0.41 MCAODC_04505 yihY virulence factor BrkB family protein 0.61 MCAODC_15855 pspF phage shock protein operon transcriptional activator low > 87
Escherichia coli ECOR38 0.41 HEPCGN_12640 yihY virulence factor BrkB family protein 0.61 HEPCGN_25785 pspF phage shock protein operon transcriptional activator low > 88
Escherichia coli ECRC99 0.41 KEDOAH_14150 yihY virulence factor BrkB family protein 0.61 KEDOAH_26360 pspF phage shock protein operon transcriptional activator — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2241 Inner membrane protein YihY, formerly thought to be RNase BN 0.61 GFF2687 Psp operon transcriptional activator low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_04168 hypothetical protein 0.61 OHPLBJKB_02379 Psp operon transcriptional activator low > 74
Escherichia coli BL21 0.41 ECD_03771 BrkB family putative transporter, inner membrane protein 0.61 ECD_01280 psp operon transcriptional activator — —
Escherichia coli ECRC98 0.41 JDDGAC_17630 yihY virulence factor BrkB family protein 0.61 JDDGAC_04960 pspF phage shock protein operon transcriptional activator low > 87
Escherichia coli BW25113 0.41 b3886 rbn ribonuclease BN (NCBI) 0.61 b1303 pspF psp operon transcriptional activator (VIMSS) low > 76
Escherichia coli ECRC100 0.41 OKFHMN_14005 yihY virulence factor BrkB family protein 0.61 OKFHMN_02415 pspF phage shock protein operon transcriptional activator low > 79
Erwinia amylovora T8 0.40 OLJFJH_05520 virulence factor BrkB family protein 0.59 OLJFJH_13670 phage shock protein operon transcriptional activator low > 58
Escherichia coli ECOR27 0.40 NOLOHH_06140 yihY virulence factor BrkB family protein 0.61 NOLOHH_20100 pspF phage shock protein operon transcriptional activator low > 76
Erwinia tracheiphila SCR3 0.39 LU632_RS22160 virulence factor BrkB family protein 0.61 LU632_RS11565 pspF phage shock protein operon transcriptional activator low > 73
Erwinia tracheiphila HP pepo 2.2 0.39 IJEDHG_08310 virulence factor BrkB family protein 0.61 IJEDHG_23015 pspF phage shock protein operon transcriptional activator low > 61
Sphingobium sp. HT1-2 0.09 GFF1875 Ribonuclease BN 0.45 GFF989 Psp operon transcriptional activator low > 95

Not shown: 8 genomes with orthologs for CSW01_13830 only; 10 genomes with orthologs for CSW01_08440 only