Conservation of cofitness between CSW01_05550 and CSW01_08130 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05550 oligopeptide ABC transporter permease OppB 1.0 CSW01_08130 LysR family transcriptional regulator 0.73 1
Enterobacter sp. TBS_079 0.71 MPMX20_02586 Oligopeptide transport system permease protein OppB 0.20 MPMX20_03081 Hydrogen peroxide-inducible genes activator low > 85
Escherichia coli BL21 0.71 ECD_01218 oligopeptide ABC transporter permease 0.24 ECD_00292 transcriptional activator of cyn operon; autorepressor low > 61
Escherichia coli ECRC102 0.71 NIAGMN_27600 oppB oligopeptide ABC transporter permease OppB 0.24 NIAGMN_06895 cynR transcriptional regulator CynR low > 80
Escherichia coli ECRC62 0.71 BNILDI_18560 oppB oligopeptide ABC transporter permease OppB 0.23 BNILDI_23155 cynR transcriptional regulator CynR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_02439 Oligopeptide transport system permease protein OppB 0.23 OHPLBJKB_03333 HTH-type transcriptional regulator CynR low > 74
Escherichia coli Nissle 1917 0.71 ECOLIN_RS07515 oligopeptide ABC transporter permease OppB 0.21 ECOLIN_RS04090 LysR family transcriptional regulator — —
Escherichia coli ECRC98 0.71 JDDGAC_05940 oppB oligopeptide ABC transporter permease OppB 0.24 JDDGAC_12495 cynR transcriptional regulator CynR low > 87
Escherichia coli BW25113 0.71 b1244 oppB oligopeptide permease ABC transporter membrane protein (NCBI) 0.24 b0338 cynR DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECRC99 0.71 KEDOAH_25630 oppB oligopeptide ABC transporter permease OppB 0.24 KEDOAH_19125 cynR transcriptional regulator CynR — —
Escherichia fergusonii Becca 0.71 EFB2_02681 Oligopeptide transport system permease protein OppB 0.21 EFB2_03338 Hydrogen peroxide-inducible genes activator low > 86
Escherichia coli ECRC100 0.71 OKFHMN_28635 oppB oligopeptide ABC transporter permease OppB 0.24 OKFHMN_08840 cynR transcriptional regulator CynR low > 79
Escherichia coli ECOR27 0.71 NOLOHH_20415 oppB oligopeptide ABC transporter permease OppB 0.23 NOLOHH_01740 cynR transcriptional regulator CynR low > 76
Escherichia coli ECOR38 0.71 HEPCGN_25100 oppB oligopeptide ABC transporter permease OppB 0.24 HEPCGN_07455 cynR transcriptional regulator CynR low > 88
Escherichia coli ECRC101 0.71 MCAODC_21625 oppB oligopeptide ABC transporter permease OppB 0.24 MCAODC_28070 cynR transcriptional regulator CynR low > 87
Klebsiella michiganensis M5al 0.71 BWI76_RS17235 peptide ABC transporter permease 0.22 BWI76_RS04365 LysR family transcriptional regulator low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2745 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.26 GFF11 Transcriptional regulator, lysR family — —
Klebsiella pneumoniae MKP103 0.70 KDGMDA_24470 oligopeptide ABC transporter permease OppB 0.25 KDGMDA_27335 transcriptional regulator CynR low > 95
Serratia liquefaciens MT49 0.70 IAI46_14200 oligopeptide ABC transporter permease OppB 0.23 IAI46_07810 transcriptional regulator CynR low > 87
Dickeya dadantii 3937 0.69 DDA3937_RS10380 oligopeptide ABC transporter permease OppB 0.20 DDA3937_RS07805 LysR family transcriptional regulator low > 74
Sinorhizobium meliloti 1021 0.56 SM_b21197 oligopeptide uptake ABC transporter permease 0.18 SMc01651 transcriptional regulator low > 103
Agrobacterium fabrum C58 0.52 Atu4258 oligopeptide ABC transporter permease 0.19 Atu4264 LysR family transcriptional regulator low > 89
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_03128 oligopeptide transport system permease protein 0.21 H281DRAFT_02659 LysR family transcriptional regulator, cyn operon transcriptional activator — —
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS22045 peptide ABC transporter permease 0.23 BPHYT_RS10635 transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS18355 ABC transporter permease subunit 0.21 QEN71_RS37760 transcriptional regulator CynR low > 153
Rhizobium sp. OAE497 0.50 ABIE40_RS13570 ABC transporter permease subunit 0.19 ABIE40_RS16890 LysR family transcriptional regulator low > 107
Bosea sp. OAE506 0.35 ABIE41_RS21965 ABC transporter permease 0.20 ABIE41_RS22670 LysR substrate-binding domain-containing protein low > 77
Azospirillum sp. SherDot2 0.34 MPMX19_02826 Dipeptide transport system permease protein DppB 0.19 MPMX19_03557 HTH-type transcriptional regulator CynR low > 112
Variovorax sp. SCN45 0.34 GFF1213 Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC 0.18 GFF6064 Transcriptional regulator YfeR, LysR family — —
Variovorax sp. OAS795 0.34 ABID97_RS15400 glutathione ABC transporter permease GsiC 0.21 ABID97_RS28905 LysR substrate-binding domain-containing protein low > 91
Ralstonia solanacearum PSI07 0.33 RPSI07_RS17230 glutathione ABC transporter permease GsiC 0.17 RPSI07_RS03240 LysR family transcriptional regulator low > 81
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS11715 glutathione ABC transporter permease GsiC 0.19 ABZR87_RS04670 LysR family transcriptional regulator low > 80
Pseudomonas putida KT2440 0.33 PP_4455 glutathione ABC transporter permease subunit 0.29 PP_3366 Transcriptional regulator, LysR family low > 96
Azospirillum brasilense Sp245 0.33 AZOBR_RS23020 ABC transporter permease 0.21 AZOBR_RS28100 LysR family transcriptional regulator low > 97
Castellaniella sp019104865 MT123 0.30 ABCV34_RS13520 glutathione ABC transporter permease GsiC 0.21 ABCV34_RS13660 LysR family transcriptional regulator low > 48
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS19860 ABC transporter permease 0.19 ABZR88_RS05415 LysR substrate-binding domain-containing protein low > 71
Magnetospirillum magneticum AMB-1 0.25 AMB_RS09975 ABC transporter permease 0.17 AMB_RS01265 LysR family transcriptional regulator low > 64

Not shown: 28 genomes with orthologs for CSW01_05550 only; 20 genomes with orthologs for CSW01_08130 only