Conservation of cofitness between CSW01_08130 and CSW01_05550 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08130 LysR family transcriptional regulator 1.0 CSW01_05550 oligopeptide ABC transporter permease OppB 0.73 1
Pseudomonas putida KT2440 0.29 PP_3366 Transcriptional regulator, LysR family 0.33 PP_4455 glutathione ABC transporter permease subunit low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF11 Transcriptional regulator, lysR family 0.71 GFF2745 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) — —
Klebsiella pneumoniae MKP103 0.25 KDGMDA_27335 transcriptional regulator CynR 0.70 KDGMDA_24470 oligopeptide ABC transporter permease OppB low > 95
Escherichia coli ECRC98 0.24 JDDGAC_12495 cynR transcriptional regulator CynR 0.71 JDDGAC_05940 oppB oligopeptide ABC transporter permease OppB low > 87
Escherichia coli ECRC99 0.24 KEDOAH_19125 cynR transcriptional regulator CynR 0.71 KEDOAH_25630 oppB oligopeptide ABC transporter permease OppB — —
Escherichia coli ECRC101 0.24 MCAODC_28070 cynR transcriptional regulator CynR 0.71 MCAODC_21625 oppB oligopeptide ABC transporter permease OppB low > 87
Escherichia coli ECRC100 0.24 OKFHMN_08840 cynR transcriptional regulator CynR 0.71 OKFHMN_28635 oppB oligopeptide ABC transporter permease OppB low > 79
Escherichia coli ECRC102 0.24 NIAGMN_06895 cynR transcriptional regulator CynR 0.71 NIAGMN_27600 oppB oligopeptide ABC transporter permease OppB low > 80
Escherichia coli ECOR38 0.24 HEPCGN_07455 cynR transcriptional regulator CynR 0.71 HEPCGN_25100 oppB oligopeptide ABC transporter permease OppB low > 88
Escherichia coli BW25113 0.24 b0338 cynR DNA-binding transcriptional dual regulator (NCBI) 0.71 b1244 oppB oligopeptide permease ABC transporter membrane protein (NCBI) low > 76
Escherichia coli BL21 0.24 ECD_00292 transcriptional activator of cyn operon; autorepressor 0.71 ECD_01218 oligopeptide ABC transporter permease low > 61
Escherichia coli ECRC62 0.23 BNILDI_23155 cynR transcriptional regulator CynR 0.71 BNILDI_18560 oppB oligopeptide ABC transporter permease OppB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03333 HTH-type transcriptional regulator CynR 0.71 OHPLBJKB_02439 Oligopeptide transport system permease protein OppB low > 74
Serratia liquefaciens MT49 0.23 IAI46_07810 transcriptional regulator CynR 0.70 IAI46_14200 oligopeptide ABC transporter permease OppB low > 87
Escherichia coli ECOR27 0.23 NOLOHH_01740 cynR transcriptional regulator CynR 0.71 NOLOHH_20415 oppB oligopeptide ABC transporter permease OppB low > 76
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS10635 transcriptional regulator 0.51 BPHYT_RS22045 peptide ABC transporter permease low > 109
Klebsiella michiganensis M5al 0.22 BWI76_RS04365 LysR family transcriptional regulator 0.71 BWI76_RS17235 peptide ABC transporter permease low > 92
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_02659 LysR family transcriptional regulator, cyn operon transcriptional activator 0.52 H281DRAFT_03128 oligopeptide transport system permease protein — —
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS37760 transcriptional regulator CynR 0.51 QEN71_RS18355 ABC transporter permease subunit low > 153
Escherichia coli Nissle 1917 0.21 ECOLIN_RS04090 LysR family transcriptional regulator 0.71 ECOLIN_RS07515 oligopeptide ABC transporter permease OppB — —
Escherichia fergusonii Becca 0.21 EFB2_03338 Hydrogen peroxide-inducible genes activator 0.71 EFB2_02681 Oligopeptide transport system permease protein OppB low > 86
Castellaniella sp019104865 MT123 0.21 ABCV34_RS13660 LysR family transcriptional regulator 0.30 ABCV34_RS13520 glutathione ABC transporter permease GsiC low > 48
Variovorax sp. OAS795 0.21 ABID97_RS28905 LysR substrate-binding domain-containing protein 0.34 ABID97_RS15400 glutathione ABC transporter permease GsiC low > 91
Azospirillum brasilense Sp245 0.21 AZOBR_RS28100 LysR family transcriptional regulator 0.33 AZOBR_RS23020 ABC transporter permease low > 97
Enterobacter sp. TBS_079 0.20 MPMX20_03081 Hydrogen peroxide-inducible genes activator 0.71 MPMX20_02586 Oligopeptide transport system permease protein OppB low > 85
Bosea sp. OAE506 0.20 ABIE41_RS22670 LysR substrate-binding domain-containing protein 0.35 ABIE41_RS21965 ABC transporter permease low > 77
Dickeya dadantii 3937 0.20 DDA3937_RS07805 LysR family transcriptional regulator 0.69 DDA3937_RS10380 oligopeptide ABC transporter permease OppB low > 74
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS04670 LysR family transcriptional regulator 0.33 ABZR87_RS11715 glutathione ABC transporter permease GsiC low > 80
Azospirillum sp. SherDot2 0.19 MPMX19_03557 HTH-type transcriptional regulator CynR 0.34 MPMX19_02826 Dipeptide transport system permease protein DppB low > 112
Rhizobium sp. OAE497 0.19 ABIE40_RS16890 LysR family transcriptional regulator 0.50 ABIE40_RS13570 ABC transporter permease subunit low > 107
Agrobacterium fabrum C58 0.19 Atu4264 LysR family transcriptional regulator 0.52 Atu4258 oligopeptide ABC transporter permease low > 89
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS05415 LysR substrate-binding domain-containing protein 0.26 ABZR88_RS19860 ABC transporter permease low > 71
Variovorax sp. SCN45 0.18 GFF6064 Transcriptional regulator YfeR, LysR family 0.34 GFF1213 Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC — —
Sinorhizobium meliloti 1021 0.18 SMc01651 transcriptional regulator 0.56 SM_b21197 oligopeptide uptake ABC transporter permease low > 103
Magnetospirillum magneticum AMB-1 0.17 AMB_RS01265 LysR family transcriptional regulator 0.25 AMB_RS09975 ABC transporter permease low > 64
Ralstonia solanacearum PSI07 0.17 RPSI07_RS03240 LysR family transcriptional regulator 0.33 RPSI07_RS17230 glutathione ABC transporter permease GsiC low > 81

Not shown: 20 genomes with orthologs for CSW01_08130 only; 28 genomes with orthologs for CSW01_05550 only