| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_19040 | | FAD-binding oxidoreductase | 1.0 | CSW01_05250 | | zinc/cadmium/mercury/lead-transporting ATPase | 0.65 | 4 |
| Pseudomonas sp. SVBP6 | 0.53 | COO64_RS15320 | | FAD-binding and (Fe-S)-binding domain-containing protein | 0.29 | COO64_RS12730 | | heavy metal translocating P-type ATPase | low | > 93 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_07570 | | 4Fe-4S ferredoxin | 0.29 | AO356_10380 | | ATPase P | 0.59 | 12 |
| Pseudomonas fluorescens FW300-N2E2 | 0.53 | Pf6N2E2_3385 | | Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing | 0.29 | Pf6N2E2_3948 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | low | > 103 |
| Pseudomonas putida KT2440 | 0.53 | PP_4737 | | D-lactate dehydrogenase | 0.29 | PP_5139 | | cadmium translocating P-type ATPase | low | > 96 |
| Pseudomonas sp. RS175 | 0.52 | PFR28_00059 | | hypothetical protein | 0.29 | PFR28_04824 | | Cadmium-transporting ATPase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.52 | PfGW456L13_5118 | | D-lactate dehydrogenase (quinone), FeS subunit (EC 1.1.5.12) (from data) | 0.29 | PfGW456L13_959 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | low | > 87 |
| Pseudomonas sp. DMC3 | 0.52 | GFF4959 | | hypothetical protein | 0.30 | GFF258 | | Cadmium-transporting ATPase | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.52 | AO353_05720 | | 4Fe-4S ferredoxin | 0.30 | AO353_08420 | | ATPase P | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS25950 | | FAD-binding oxidoreductase | 0.29 | PFLU_RS28615 | | heavy metal translocating P-type ATPase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS25950 | | FAD-binding oxidoreductase | 0.29 | PFLU_RS28615 | | heavy metal translocating P-type ATPase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_24110 | | 4Fe-4S ferredoxin | 0.29 | PS417_26955 | | ATPase P | — | — |
| Pseudomonas orientalis W4I3 | 0.52 | QF045_RS26365 | | FAD-binding and (Fe-S)-binding domain-containing protein | 0.29 | QF045_RS01350 | | heavy metal translocating P-type ATPase | low | > 93 |
| Pseudomonas sp. BP01 | 0.52 | JOY50_RS26695 | | FAD-binding and (Fe-S)-binding domain-containing protein | 0.29 | JOY50_RS20695 | | heavy metal translocating P-type ATPase | low | > 84 |
| Pseudomonas lactucae CFBP13502 | 0.52 | GEMAOFIL_04972 | | hypothetical protein | 0.29 | GEMAOFIL_05532 | | Potassium-transporting ATPase ATP-binding subunit | low | > 96 |
| Pseudomonas segetis P6 | 0.52 | MPMX49_01171 | | hypothetical protein | 0.29 | MPMX49_00094 | | Potassium-transporting ATPase ATP-binding subunit | low | > 75 |
| Pseudomonas fluorescens FW300-N1B4 | 0.52 | Pf1N1B4_1190 | | Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing | 0.30 | Pf1N1B4_2291 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | low | > 87 |
| Pseudomonas aeruginosa PUPa3 | 0.51 | DQ20_RS52420 | | FAD-binding and (Fe-S)-binding domain-containing protein | 0.29 | DQ20_RS42600 | | heavy metal translocating P-type ATPase | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.51 | DY961_RS09620 | | FAD-binding and (Fe-S)-binding domain-containing protein | 0.29 | DY961_RS14525 | | heavy metal translocating P-type ATPase | low | > 100 |
| Pseudomonas aeruginosa PA14 | 0.51 | IKLFDK_29730 | | 4Fe-4S ferredoxin | 0.29 | IKLFDK_18840 | | cadmium-translocating P-type ATPase | low | > 98 |
| Azospirillum sp. SherDot2 | 0.51 | MPMX19_06092 | | hypothetical protein | 0.37 | MPMX19_06375 | | Zinc/cadmium/lead-transporting P-type ATPase | low | > 112 |
| Azospirillum brasilense Sp245 | 0.50 | AZOBR_RS25120 | | 4Fe-4S ferredoxin | 0.37 | AZOBR_RS26655 | | ATPase | low | > 97 |
| Rhodospirillum rubrum S1H | 0.49 | Rru_A1410 | | 4Fe-4S ferredoxin (NCBI) | 0.30 | Rru_A1027 | | (Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (NCBI) | low | > 58 |
Not shown: 12 genomes with orthologs for CSW01_19040 only; 53 genomes with orthologs for CSW01_05250 only